Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH4P55283 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH4P55283 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH4P55283 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH4P55283 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH4P55283 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH4P55283 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH4P55283 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH4P55283 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH4P55283 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.5■□□□□ 0.39
CDH4P55283 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH4P55283 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH4P55283 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH4P55283 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH4P55283 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH4P55283 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH4P55283 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH4P55283 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 AL645608.8-201ENST00000606034 2086 ntBASIC17.49■□□□□ 0.39
CDH4P55283 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CDH4P55283 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDH4P55283 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.49■□□□□ 0.39
CDH4P55283 AC096734.2-201ENST00000562054 433 ntBASIC17.49■□□□□ 0.39
CDH4P55283 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH4P55283 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.49■□□□□ 0.39
CDH4P55283 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.49■□□□□ 0.39
CDH4P55283 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH4P55283 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
CDH4P55283 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDH4P55283 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH4P55283 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH4P55283 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH4P55283 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH4P55283 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDH4P55283 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDH4P55283 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDH4P55283 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH4P55283 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH4P55283 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.48■□□□□ 0.39
CDH4P55283 KRT18P2-201ENST00000447938 1258 ntBASIC17.48■□□□□ 0.39
CDH4P55283 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH4P55283 CXCL1P1-201ENST00000502804 216 ntBASIC17.48■□□□□ 0.39
CDH4P55283 PGAM5P1-201ENST00000518923 814 ntBASIC17.48■□□□□ 0.39
CDH4P55283 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH4P55283 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH4P55283 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH4P55283 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CDH4P55283 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH4P55283 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH4P55283 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDH4P55283 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH4P55283 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH4P55283 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH4P55283 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.47■□□□□ 0.39
CDH4P55283 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.47■□□□□ 0.39
CDH4P55283 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CDH4P55283 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.47■□□□□ 0.39
CDH4P55283 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH4P55283 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH4P55283 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH4P55283 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH4P55283 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CDH4P55283 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.47■□□□□ 0.39
CDH4P55283 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms