Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ITGA8P53708 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.64■□□□□ 0.41
ITGA8P53708 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ITGA8P53708 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.64■□□□□ 0.41
ITGA8P53708 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ITGA8P53708 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ITGA8P53708 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITGA8P53708 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ITGA8P53708 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.63■□□□□ 0.41
ITGA8P53708 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.63■□□□□ 0.41
ITGA8P53708 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.63■□□□□ 0.41
ITGA8P53708 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 AC092647.4-201ENST00000457211 535 ntBASIC17.63■□□□□ 0.41
ITGA8P53708 STK19B-204ENST00000512515 211 ntBASIC17.63■□□□□ 0.41
ITGA8P53708 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ITGA8P53708 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.63■□□□□ 0.41
ITGA8P53708 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.63■□□□□ 0.41
ITGA8P53708 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.63■□□□□ 0.41
ITGA8P53708 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.63■□□□□ 0.41
ITGA8P53708 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ITGA8P53708 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.63■□□□□ 0.41
ITGA8P53708 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.63■□□□□ 0.41
ITGA8P53708 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
ITGA8P53708 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ITGA8P53708 GPR89P-201ENST00000407924 1495 ntBASIC17.63■□□□□ 0.41
ITGA8P53708 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITGA8P53708 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ITGA8P53708 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
ITGA8P53708 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.62■□□□□ 0.41
ITGA8P53708 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.62■□□□□ 0.41
ITGA8P53708 CYP2T1P-202ENST00000641596 2535 ntBASIC17.62■□□□□ 0.41
ITGA8P53708 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ITGA8P53708 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.62■□□□□ 0.41
ITGA8P53708 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.62■□□□□ 0.41
ITGA8P53708 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.62■□□□□ 0.41
ITGA8P53708 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.62■□□□□ 0.41
ITGA8P53708 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.62■□□□□ 0.41
ITGA8P53708 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.62■□□□□ 0.41
ITGA8P53708 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.62■□□□□ 0.41
ITGA8P53708 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
ITGA8P53708 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.62■□□□□ 0.41
ITGA8P53708 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITGA8P53708 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.62■□□□□ 0.41
ITGA8P53708 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.62■□□□□ 0.41
ITGA8P53708 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ITGA8P53708 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.61■□□□□ 0.41
ITGA8P53708 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.61■□□□□ 0.41
ITGA8P53708 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.61■□□□□ 0.41
ITGA8P53708 HLA-A-202ENST00000376806 1854 ntBASIC17.61■□□□□ 0.41
ITGA8P53708 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
ITGA8P53708 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms