Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMSP52788 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMSP52788 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMSP52788 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.12■□□□□ 0.17
SMSP52788 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMSP52788 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.12■□□□□ 0.17
SMSP52788 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SMSP52788 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SMSP52788 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMSP52788 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SMSP52788 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.12■□□□□ 0.17
SMSP52788 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.12■□□□□ 0.17
SMSP52788 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMSP52788 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.12■□□□□ 0.17
SMSP52788 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMSP52788 FAM220CP-201ENST00000395253 831 ntBASIC16.12■□□□□ 0.17
SMSP52788 BX842568.4-201ENST00000421222 227 ntBASIC16.12■□□□□ 0.17
SMSP52788 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMSP52788 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.12■□□□□ 0.17
SMSP52788 RPL13AP23-201ENST00000480739 586 ntBASIC16.12■□□□□ 0.17
SMSP52788 AC113404.2-201ENST00000507884 177 ntBASIC16.12■□□□□ 0.17
SMSP52788 POLD2P1-201ENST00000511220 997 ntBASIC16.12■□□□□ 0.17
SMSP52788 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.12■□□□□ 0.17
SMSP52788 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SMSP52788 AL355877.3-201ENST00000622820 899 ntBASIC16.12■□□□□ 0.17
SMSP52788 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.12■□□□□ 0.17
SMSP52788 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SMSP52788 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMSP52788 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMSP52788 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.12■□□□□ 0.17
SMSP52788 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMSP52788 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.12■□□□□ 0.17
SMSP52788 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMSP52788 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
SMSP52788 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SMSP52788 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SMSP52788 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
SMSP52788 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMSP52788 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.11■□□□□ 0.17
SMSP52788 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMSP52788 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMSP52788 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.11■□□□□ 0.17
SMSP52788 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SMSP52788 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.11■□□□□ 0.17
SMSP52788 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMSP52788 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.11■□□□□ 0.17
SMSP52788 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMSP52788 MIR940-201ENST00000401276 94 ntBASIC16.11■□□□□ 0.17
SMSP52788 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.11■□□□□ 0.17
SMSP52788 AC009533.2-201ENST00000543664 586 ntBASIC16.11■□□□□ 0.17
SMSP52788 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.11■□□□□ 0.17
SMSP52788 AC148477.8-201ENST00000624298 468 ntBASIC16.11■□□□□ 0.17
SMSP52788 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMSP52788 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMSP52788 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.11■□□□□ 0.17
SMSP52788 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMSP52788 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMSP52788 AC016396.2-201ENST00000562575 1417 ntBASIC16.11■□□□□ 0.17
SMSP52788 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMSP52788 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SMSP52788 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMSP52788 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMSP52788 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.1■□□□□ 0.17
SMSP52788 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMSP52788 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMSP52788 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SMSP52788 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SMSP52788 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMSP52788 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.1■□□□□ 0.17
SMSP52788 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SMSP52788 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMSP52788 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMSP52788 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMSP52788 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
SMSP52788 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SMSP52788 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMSP52788 AC018712.1-201ENST00000455767 687 ntBASIC16.1■□□□□ 0.17
SMSP52788 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.1■□□□□ 0.17
SMSP52788 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.1■□□□□ 0.17
SMSP52788 MTDHP3-201ENST00000594186 672 ntBASIC16.1■□□□□ 0.17
SMSP52788 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.1■□□□□ 0.17
SMSP52788 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SMSP52788 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMSP52788 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMSP52788 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.1■□□□□ 0.17
SMSP52788 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SMSP52788 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.1■□□□□ 0.17
SMSP52788 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMSP52788 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMSP52788 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.1■□□□□ 0.17
SMSP52788 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SMSP52788 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMSP52788 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.1■□□□□ 0.17
SMSP52788 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SMSP52788 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMSP52788 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMSP52788 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.09■□□□□ 0.17
SMSP52788 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SMSP52788 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMSP52788 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms