Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.12■□□□□ 0.01
CX3CR1P49238 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CX3CR1P49238 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CX3CR1P49238 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CX3CR1P49238 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CX3CR1P49238 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.12■□□□□ 0.01
CX3CR1P49238 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.12■□□□□ 0.01
CX3CR1P49238 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CX3CR1P49238 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.12■□□□□ 0.01
CX3CR1P49238 AC074051.2-201ENST00000565115 352 ntBASIC15.12■□□□□ 0.01
CX3CR1P49238 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.12■□□□□ 0.01
CX3CR1P49238 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.12■□□□□ 0.01
CX3CR1P49238 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.12■□□□□ 0.01
CX3CR1P49238 AD001527.2-201ENST00000622994 785 ntBASIC15.12■□□□□ 0.01
CX3CR1P49238 AC073592.5-201ENST00000624854 528 ntBASIC15.12■□□□□ 0.01
CX3CR1P49238 AP000550.4-202ENST00000639755 178 ntBASIC15.12■□□□□ 0.01
CX3CR1P49238 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CX3CR1P49238 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CX3CR1P49238 AC132938.5-201ENST00000624980 1813 ntBASIC15.12■□□□□ 0.01
CX3CR1P49238 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CX3CR1P49238 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CX3CR1P49238 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CX3CR1P49238 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.12■□□□□ 0.01
CX3CR1P49238 AC005915.1-201ENST00000624912 2018 ntBASIC15.12■□□□□ 0.01
CX3CR1P49238 AL135999.2-201ENST00000622438 1686 ntBASIC15.12■□□□□ 0.01
CX3CR1P49238 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CX3CR1P49238 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CX3CR1P49238 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CX3CR1P49238 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
CX3CR1P49238 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CX3CR1P49238 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CX3CR1P49238 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CX3CR1P49238 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CX3CR1P49238 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.11■□□□□ 0.01
CX3CR1P49238 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.11■□□□□ 0.01
CX3CR1P49238 AC046158.3-201ENST00000624947 2558 ntBASIC15.11■□□□□ 0.01
CX3CR1P49238 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CX3CR1P49238 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CX3CR1P49238 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.11■□□□□ 0.01
CX3CR1P49238 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.11■□□□□ 0.01
CX3CR1P49238 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.11■□□□□ 0.01
CX3CR1P49238 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.11■□□□□ 0.01
CX3CR1P49238 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.11■□□□□ 0.01
CX3CR1P49238 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.11■□□□□ 0.01
CX3CR1P49238 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.11■□□□□ 0.01
CX3CR1P49238 BNIP3P18-201ENST00000593976 575 ntBASIC15.11■□□□□ 0.01
CX3CR1P49238 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.11■□□□□ 0.01
CX3CR1P49238 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
CX3CR1P49238 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.11■□□□□ 0.01
CX3CR1P49238 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.11■□□□□ 0.01
CX3CR1P49238 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.11■□□□□ 0.01
CX3CR1P49238 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.11■□□□□ 0.01
CX3CR1P49238 EGFEM1P-202ENST00000431685 1563 ntBASIC15.11■□□□□ 0.01
CX3CR1P49238 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.11■□□□□ 0.01
CX3CR1P49238 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CX3CR1P49238 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CX3CR1P49238 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CX3CR1P49238 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CX3CR1P49238 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CX3CR1P49238 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CX3CR1P49238 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CX3CR1P49238 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.1■□□□□ 0.01
CX3CR1P49238 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CX3CR1P49238 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.1■□□□□ 0.01
CX3CR1P49238 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CX3CR1P49238 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CX3CR1P49238 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CX3CR1P49238 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CX3CR1P49238 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CX3CR1P49238 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CX3CR1P49238 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.1■□□□□ 0.01
CX3CR1P49238 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CX3CR1P49238 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CX3CR1P49238 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CX3CR1P49238 AP000867.3-201ENST00000524675 377 ntBASIC15.1■□□□□ 0.01
CX3CR1P49238 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.1■□□□□ 0.01
CX3CR1P49238 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.1■□□□□ 0.01
CX3CR1P49238 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.1■□□□□ 0.01
CX3CR1P49238 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.1■□□□□ 0.01
CX3CR1P49238 AC069148.1-201ENST00000608741 768 ntBASIC15.1■□□□□ 0.01
CX3CR1P49238 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms