Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.31■□□□□ 0.52
SSR1P43307 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SSR1P43307 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.31■□□□□ 0.52
SSR1P43307 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.31■□□□□ 0.52
SSR1P43307 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR1P43307 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR1P43307 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.31■□□□□ 0.52
SSR1P43307 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR1P43307 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSR1P43307 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.31■□□□□ 0.52
SSR1P43307 IER3-202ENST00000376377 1350 ntBASIC18.3■□□□□ 0.52
SSR1P43307 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SSR1P43307 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC18.3■□□□□ 0.52
SSR1P43307 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.3■□□□□ 0.52
SSR1P43307 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.3■□□□□ 0.52
SSR1P43307 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SSR1P43307 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SSR1P43307 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.3■□□□□ 0.52
SSR1P43307 TSSC2-201ENST00000450217 709 ntBASIC18.3■□□□□ 0.52
SSR1P43307 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.3■□□□□ 0.52
SSR1P43307 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.3■□□□□ 0.52
SSR1P43307 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.3■□□□□ 0.52
SSR1P43307 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.3■□□□□ 0.52
SSR1P43307 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SSR1P43307 AC046185.3-201ENST00000623228 1824 ntBASIC18.3■□□□□ 0.52
SSR1P43307 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.3■□□□□ 0.52
SSR1P43307 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.3■□□□□ 0.52
SSR1P43307 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR1P43307 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.29■□□□□ 0.52
SSR1P43307 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.29■□□□□ 0.52
SSR1P43307 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.29■□□□□ 0.52
SSR1P43307 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SSR1P43307 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.29■□□□□ 0.52
SSR1P43307 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SSR1P43307 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.29■□□□□ 0.52
SSR1P43307 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.29■□□□□ 0.52
SSR1P43307 MINOS1P3-201ENST00000457048 203 ntBASIC18.29■□□□□ 0.52
SSR1P43307 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.29■□□□□ 0.52
SSR1P43307 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.29■□□□□ 0.52
SSR1P43307 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.29■□□□□ 0.52
SSR1P43307 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.29■□□□□ 0.52
SSR1P43307 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.29■□□□□ 0.52
SSR1P43307 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
SSR1P43307 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.29■□□□□ 0.52
SSR1P43307 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SSR1P43307 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SSR1P43307 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.29■□□□□ 0.52
SSR1P43307 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSR1P43307 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.28■□□□□ 0.52
SSR1P43307 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR1P43307 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms