Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 LYSMD4-203ENST00000378904 2122 ntBASIC19.55■□□□□ 0.72
COPB2P35606 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPB2P35606 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
COPB2P35606 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPB2P35606 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COPB2P35606 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPB2P35606 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPB2P35606 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COPB2P35606 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPB2P35606 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.55■□□□□ 0.72
COPB2P35606 AL671277.1-201ENST00000429656 993 ntBASIC19.55■□□□□ 0.72
COPB2P35606 TIMM8BP1-201ENST00000452384 211 ntBASIC19.55■□□□□ 0.72
COPB2P35606 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.55■□□□□ 0.72
COPB2P35606 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.55■□□□□ 0.72
COPB2P35606 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.55■□□□□ 0.72
COPB2P35606 AC099522.2-201ENST00000607001 744 ntBASIC19.55■□□□□ 0.72
COPB2P35606 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPB2P35606 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPB2P35606 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.55■□□□□ 0.72
COPB2P35606 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COPB2P35606 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.55■□□□□ 0.72
COPB2P35606 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPB2P35606 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.55■□□□□ 0.72
COPB2P35606 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPB2P35606 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.55■□□□□ 0.72
COPB2P35606 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPB2P35606 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
COPB2P35606 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COPB2P35606 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.55■□□□□ 0.72
COPB2P35606 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.54■□□□□ 0.72
COPB2P35606 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.54■□□□□ 0.72
COPB2P35606 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
COPB2P35606 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
COPB2P35606 SPDYE11-202ENST00000450699 704 ntBASIC19.54■□□□□ 0.72
COPB2P35606 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.54■□□□□ 0.72
COPB2P35606 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.54■□□□□ 0.72
COPB2P35606 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.54■□□□□ 0.72
COPB2P35606 SPDYE9P-201ENST00000570642 692 ntBASIC19.54■□□□□ 0.72
COPB2P35606 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.54■□□□□ 0.72
COPB2P35606 SPDYE10P-202ENST00000612005 668 ntBASIC19.54■□□□□ 0.72
COPB2P35606 SPDYE8P-202ENST00000612377 668 ntBASIC19.54■□□□□ 0.72
COPB2P35606 AL161645.1-201ENST00000622716 1255 ntBASIC19.54■□□□□ 0.72
COPB2P35606 AC009093.7-201ENST00000623853 1223 ntBASIC19.54■□□□□ 0.72
COPB2P35606 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.54■□□□□ 0.72
COPB2P35606 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.54■□□□□ 0.72
COPB2P35606 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.54■□□□□ 0.72
COPB2P35606 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.54■□□□□ 0.72
COPB2P35606 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COPB2P35606 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.53■□□□□ 0.72
COPB2P35606 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COPB2P35606 AKAP8P1-201ENST00000434743 1349 ntBASIC19.53■□□□□ 0.72
COPB2P35606 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
COPB2P35606 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.53■□□□□ 0.72
COPB2P35606 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.53■□□□□ 0.72
COPB2P35606 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.53■□□□□ 0.72
COPB2P35606 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COPB2P35606 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.53■□□□□ 0.72
COPB2P35606 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COPB2P35606 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COPB2P35606 AL627223.1-201ENST00000416693 442 ntBASIC19.53■□□□□ 0.72
COPB2P35606 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.53■□□□□ 0.72
COPB2P35606 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.53■□□□□ 0.72
COPB2P35606 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.53■□□□□ 0.72
COPB2P35606 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.53■□□□□ 0.72
COPB2P35606 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.53■□□□□ 0.72
COPB2P35606 AC015911.4-201ENST00000588022 1070 ntBASIC19.53■□□□□ 0.72
COPB2P35606 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COPB2P35606 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
COPB2P35606 LINC00628-201ENST00000628516 1289 ntBASIC19.53■□□□□ 0.72
COPB2P35606 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.53■□□□□ 0.72
COPB2P35606 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
COPB2P35606 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COPB2P35606 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COPB2P35606 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COPB2P35606 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.53■□□□□ 0.72
COPB2P35606 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
COPB2P35606 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
COPB2P35606 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.53■□□□□ 0.72
COPB2P35606 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.53■□□□□ 0.72
COPB2P35606 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
COPB2P35606 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COPB2P35606 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPB2P35606 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms