Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA3P29320 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.74■□□□□ 0.27
EPHA3P29320 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.74■□□□□ 0.27
EPHA3P29320 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
EPHA3P29320 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.74■□□□□ 0.27
EPHA3P29320 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.74■□□□□ 0.27
EPHA3P29320 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.74■□□□□ 0.27
EPHA3P29320 AC139887.4-201ENST00000607877 719 ntBASIC16.74■□□□□ 0.27
EPHA3P29320 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA3P29320 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA3P29320 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA3P29320 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
EPHA3P29320 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA3P29320 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.74■□□□□ 0.27
EPHA3P29320 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
EPHA3P29320 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA3P29320 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
EPHA3P29320 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
EPHA3P29320 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA3P29320 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.74■□□□□ 0.27
EPHA3P29320 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA3P29320 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA3P29320 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA3P29320 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA3P29320 Z83836.1-201ENST00000624605 1642 ntBASIC16.74■□□□□ 0.27
EPHA3P29320 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA3P29320 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
EPHA3P29320 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
EPHA3P29320 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA3P29320 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
EPHA3P29320 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.73■□□□□ 0.27
EPHA3P29320 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA3P29320 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA3P29320 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.73■□□□□ 0.27
EPHA3P29320 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA3P29320 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.73■□□□□ 0.27
EPHA3P29320 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA3P29320 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA3P29320 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
EPHA3P29320 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA3P29320 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA3P29320 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA3P29320 HBZP1-201ENST00000354915 429 ntBASIC16.73■□□□□ 0.27
EPHA3P29320 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
EPHA3P29320 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA3P29320 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.73■□□□□ 0.27
EPHA3P29320 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.73■□□□□ 0.27
EPHA3P29320 VENTXP5-201ENST00000523979 775 ntBASIC16.73■□□□□ 0.27
EPHA3P29320 RNF126P1-202ENST00000569893 925 ntBASIC16.73■□□□□ 0.27
EPHA3P29320 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.73■□□□□ 0.27
EPHA3P29320 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.73■□□□□ 0.27
EPHA3P29320 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA3P29320 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA3P29320 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
EPHA3P29320 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA3P29320 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
EPHA3P29320 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
EPHA3P29320 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
EPHA3P29320 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA3P29320 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA3P29320 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA3P29320 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.73■□□□□ 0.27
EPHA3P29320 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA3P29320 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.72■□□□□ 0.27
EPHA3P29320 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.72■□□□□ 0.27
EPHA3P29320 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA3P29320 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
EPHA3P29320 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA3P29320 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA3P29320 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA3P29320 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA3P29320 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA3P29320 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA3P29320 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA3P29320 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.72■□□□□ 0.27
EPHA3P29320 YBX1P2-201ENST00000489612 999 ntBASIC16.72■□□□□ 0.27
EPHA3P29320 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.72■□□□□ 0.27
EPHA3P29320 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA3P29320 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.72■□□□□ 0.27
EPHA3P29320 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.72■□□□□ 0.27
EPHA3P29320 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.72■□□□□ 0.27
EPHA3P29320 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
EPHA3P29320 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.72■□□□□ 0.27
EPHA3P29320 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.72■□□□□ 0.27
EPHA3P29320 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
EPHA3P29320 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA3P29320 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.72■□□□□ 0.27
EPHA3P29320 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
EPHA3P29320 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
EPHA3P29320 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA3P29320 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA3P29320 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.72■□□□□ 0.27
EPHA3P29320 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA3P29320 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.72■□□□□ 0.27
EPHA3P29320 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.72■□□□□ 0.27
EPHA3P29320 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA3P29320 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
EPHA3P29320 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.72■□□□□ 0.27
EPHA3P29320 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA3P29320 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms