Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.82■□□□□ 0.12
ABCD3P28288 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ABCD3P28288 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ABCD3P28288 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ABCD3P28288 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ABCD3P28288 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.82■□□□□ 0.12
ABCD3P28288 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ABCD3P28288 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ABCD3P28288 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ABCD3P28288 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ABCD3P28288 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ABCD3P28288 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ABCD3P28288 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ABCD3P28288 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ABCD3P28288 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.81■□□□□ 0.12
ABCD3P28288 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ABCD3P28288 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ABCD3P28288 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.81■□□□□ 0.12
ABCD3P28288 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.81■□□□□ 0.12
ABCD3P28288 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ABCD3P28288 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ABCD3P28288 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.81■□□□□ 0.12
ABCD3P28288 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ABCD3P28288 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ABCD3P28288 AC120114.3-201ENST00000611923 658 ntBASIC15.81■□□□□ 0.12
ABCD3P28288 PI4KAP1-204ENST00000612579 1703 ntBASIC15.81■□□□□ 0.12
ABCD3P28288 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ABCD3P28288 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.81■□□□□ 0.12
ABCD3P28288 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
ABCD3P28288 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.81■□□□□ 0.12
ABCD3P28288 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.81■□□□□ 0.12
ABCD3P28288 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.81■□□□□ 0.12
ABCD3P28288 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCD3P28288 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCD3P28288 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
ABCD3P28288 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ABCD3P28288 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ABCD3P28288 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCD3P28288 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCD3P28288 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ABCD3P28288 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.8■□□□□ 0.12
ABCD3P28288 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ABCD3P28288 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ABCD3P28288 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ABCD3P28288 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCD3P28288 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.8■□□□□ 0.12
ABCD3P28288 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ABCD3P28288 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ABCD3P28288 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.8■□□□□ 0.12
ABCD3P28288 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.8■□□□□ 0.12
ABCD3P28288 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.8■□□□□ 0.12
ABCD3P28288 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.8■□□□□ 0.12
ABCD3P28288 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.8■□□□□ 0.12
ABCD3P28288 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.8■□□□□ 0.12
ABCD3P28288 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.8■□□□□ 0.12
ABCD3P28288 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.8■□□□□ 0.12
ABCD3P28288 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.8■□□□□ 0.12
ABCD3P28288 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.8■□□□□ 0.12
ABCD3P28288 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ABCD3P28288 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCD3P28288 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCD3P28288 TERC-201ENST00000602385 541 ntBASIC15.8■□□□□ 0.12
ABCD3P28288 AC008667.4-201ENST00000607370 168 ntBASIC15.8■□□□□ 0.12
ABCD3P28288 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.8■□□□□ 0.12
ABCD3P28288 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCD3P28288 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ABCD3P28288 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ABCD3P28288 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCD3P28288 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
ABCD3P28288 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCD3P28288 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.8■□□□□ 0.12
ABCD3P28288 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCD3P28288 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ABCD3P28288 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCD3P28288 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.79■□□□□ 0.12
ABCD3P28288 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCD3P28288 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCD3P28288 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ABCD3P28288 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCD3P28288 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.79■□□□□ 0.12
ABCD3P28288 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ABCD3P28288 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCD3P28288 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.79■□□□□ 0.12
ABCD3P28288 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCD3P28288 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ABCD3P28288 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCD3P28288 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCD3P28288 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.79■□□□□ 0.12
ABCD3P28288 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.79■□□□□ 0.12
ABCD3P28288 RNA5SP415-201ENST00000517246 115 ntBASIC15.79■□□□□ 0.12
ABCD3P28288 IGHV3-65-201ENST00000523210 341 ntBASIC15.79■□□□□ 0.12
ABCD3P28288 UNC93B6-202ENST00000528242 690 ntBASIC15.79■□□□□ 0.12
ABCD3P28288 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.79■□□□□ 0.12
ABCD3P28288 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
ABCD3P28288 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.79■□□□□ 0.12
ABCD3P28288 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ABCD3P28288 GGTLC5P-201ENST00000617623 998 ntBASIC15.79■□□□□ 0.12
ABCD3P28288 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ABCD3P28288 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
ABCD3P28288 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms