Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
CCL1P22362 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.76□□□□□ -0.05
CCL1P22362 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.76□□□□□ -0.05
CCL1P22362 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.76□□□□□ -0.05
CCL1P22362 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.76□□□□□ -0.05
CCL1P22362 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.76□□□□□ -0.05
CCL1P22362 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.76□□□□□ -0.05
CCL1P22362 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.76□□□□□ -0.05
CCL1P22362 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.76□□□□□ -0.05
CCL1P22362 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CCL1P22362 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CCL1P22362 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCL1P22362 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CCL1P22362 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CCL1P22362 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
CCL1P22362 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL1P22362 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCL1P22362 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCL1P22362 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCL1P22362 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.75□□□□□ -0.05
CCL1P22362 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
CCL1P22362 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCL1P22362 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCL1P22362 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCL1P22362 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCL1P22362 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCL1P22362 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCL1P22362 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCL1P22362 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCL1P22362 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.75□□□□□ -0.05
CCL1P22362 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCL1P22362 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCL1P22362 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCL1P22362 PRYP5-201ENST00000451909 266 ntBASIC14.75□□□□□ -0.05
CCL1P22362 HLA-J-202ENST00000469281 1241 ntBASIC14.75□□□□□ -0.05
CCL1P22362 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.75□□□□□ -0.05
CCL1P22362 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.75□□□□□ -0.05
CCL1P22362 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.75□□□□□ -0.05
CCL1P22362 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.75□□□□□ -0.05
CCL1P22362 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.75□□□□□ -0.05
CCL1P22362 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
CCL1P22362 AC099336.1-202ENST00000602961 463 ntBASIC14.75□□□□□ -0.05
CCL1P22362 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.75□□□□□ -0.05
CCL1P22362 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.75□□□□□ -0.05
CCL1P22362 AL391256.1-201ENST00000443260 1855 ntBASIC14.75□□□□□ -0.05
CCL1P22362 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
CCL1P22362 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CCL1P22362 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.75□□□□□ -0.05
CCL1P22362 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.75□□□□□ -0.05
CCL1P22362 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CCL1P22362 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CCL1P22362 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCL1P22362 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.74□□□□□ -0.05
CCL1P22362 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL1P22362 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CCL1P22362 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL1P22362 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCL1P22362 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL1P22362 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.74□□□□□ -0.05
CCL1P22362 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.74□□□□□ -0.05
CCL1P22362 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL1P22362 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL1P22362 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.74□□□□□ -0.05
CCL1P22362 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.74□□□□□ -0.05
CCL1P22362 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
CCL1P22362 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.74□□□□□ -0.05
CCL1P22362 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL1P22362 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL1P22362 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CCL1P22362 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL1P22362 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.74□□□□□ -0.05
CCL1P22362 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL1P22362 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.74□□□□□ -0.05
CCL1P22362 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL1P22362 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.74□□□□□ -0.05
CCL1P22362 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.74□□□□□ -0.05
CCL1P22362 AL353135.1-201ENST00000606729 504 ntBASIC14.74□□□□□ -0.05
CCL1P22362 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCL1P22362 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL1P22362 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL1P22362 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.74□□□□□ -0.05
CCL1P22362 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCL1P22362 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms