Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNA3P22001 AL035456.1-201ENST00000456064 1369 ntBASIC20.78■□□□□ 0.92
KCNA3P22001 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNA3P22001 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNA3P22001 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
KCNA3P22001 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KCNA3P22001 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.78■□□□□ 0.92
KCNA3P22001 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.78■□□□□ 0.92
KCNA3P22001 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.78■□□□□ 0.92
KCNA3P22001 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.78■□□□□ 0.92
KCNA3P22001 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.78■□□□□ 0.92
KCNA3P22001 AL033527.4-201ENST00000641026 673 ntBASIC20.78■□□□□ 0.92
KCNA3P22001 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.78■□□□□ 0.92
KCNA3P22001 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
KCNA3P22001 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KCNA3P22001 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KCNA3P22001 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNA3P22001 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNA3P22001 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
KCNA3P22001 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
KCNA3P22001 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
KCNA3P22001 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
KCNA3P22001 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNA3P22001 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNA3P22001 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNA3P22001 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNA3P22001 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNA3P22001 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KCNA3P22001 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KCNA3P22001 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
KCNA3P22001 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.77■□□□□ 0.92
KCNA3P22001 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.77■□□□□ 0.92
KCNA3P22001 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
KCNA3P22001 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.77■□□□□ 0.92
KCNA3P22001 RAB43P1-201ENST00000561790 589 ntBASIC20.77■□□□□ 0.92
KCNA3P22001 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
KCNA3P22001 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
KCNA3P22001 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
KCNA3P22001 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.76■□□□□ 0.91
KCNA3P22001 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.76■□□□□ 0.91
KCNA3P22001 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNA3P22001 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNA3P22001 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNA3P22001 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNA3P22001 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNA3P22001 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNA3P22001 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNA3P22001 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.76■□□□□ 0.91
KCNA3P22001 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNA3P22001 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNA3P22001 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.76■□□□□ 0.91
KCNA3P22001 AC135586.1-201ENST00000539323 574 ntBASIC20.76■□□□□ 0.91
KCNA3P22001 BANF1P1-201ENST00000553684 263 ntBASIC20.76■□□□□ 0.91
KCNA3P22001 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.76■□□□□ 0.91
KCNA3P22001 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.76■□□□□ 0.91
KCNA3P22001 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNA3P22001 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.76■□□□□ 0.91
KCNA3P22001 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.76■□□□□ 0.91
KCNA3P22001 AC008494.3-201ENST00000606615 944 ntBASIC20.76■□□□□ 0.91
KCNA3P22001 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
KCNA3P22001 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.76■□□□□ 0.91
KCNA3P22001 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
KCNA3P22001 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNA3P22001 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.76■□□□□ 0.91
KCNA3P22001 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
KCNA3P22001 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
KCNA3P22001 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNA3P22001 AL391825.1-201ENST00000457671 1364 ntBASIC20.75■□□□□ 0.91
KCNA3P22001 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.75■□□□□ 0.91
KCNA3P22001 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNA3P22001 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNA3P22001 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNA3P22001 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNA3P22001 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNA3P22001 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNA3P22001 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNA3P22001 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
KCNA3P22001 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
KCNA3P22001 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.75■□□□□ 0.91
KCNA3P22001 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNA3P22001 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.75■□□□□ 0.91
KCNA3P22001 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.75■□□□□ 0.91
KCNA3P22001 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNA3P22001 RN7SL828P-201ENST00000607615 303 ntBASIC20.75■□□□□ 0.91
KCNA3P22001 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNA3P22001 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
KCNA3P22001 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.75■□□□□ 0.91
KCNA3P22001 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNA3P22001 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNA3P22001 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.75■□□□□ 0.91
KCNA3P22001 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNA3P22001 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNA3P22001 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNA3P22001 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
KCNA3P22001 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA3P22001 WIZP1-201ENST00000531444 2299 ntBASIC20.74■□□□□ 0.91
KCNA3P22001 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA3P22001 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
KCNA3P22001 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
KCNA3P22001 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms