Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NCLP19338 KRT8P47-201ENST00000604727 1398 ntBASIC20.49■□□□□ 0.87
NCLP19338 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NCLP19338 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NCLP19338 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.49■□□□□ 0.87
NCLP19338 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.49■□□□□ 0.87
NCLP19338 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.49■□□□□ 0.87
NCLP19338 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.49■□□□□ 0.87
NCLP19338 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 ANKRD26P3-201ENST00000454044 2748 ntBASIC20.49■□□□□ 0.87
NCLP19338 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NCLP19338 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.49■□□□□ 0.87
NCLP19338 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.49■□□□□ 0.87
NCLP19338 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NCLP19338 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
NCLP19338 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NCLP19338 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCLP19338 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCLP19338 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCLP19338 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
NCLP19338 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCLP19338 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
NCLP19338 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.48■□□□□ 0.87
NCLP19338 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.48■□□□□ 0.87
NCLP19338 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
NCLP19338 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.48■□□□□ 0.87
NCLP19338 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.48■□□□□ 0.87
NCLP19338 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCLP19338 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.48■□□□□ 0.87
NCLP19338 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.48■□□□□ 0.87
NCLP19338 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.48■□□□□ 0.87
NCLP19338 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCLP19338 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.48■□□□□ 0.87
NCLP19338 AP000550.4-202ENST00000639755 178 ntBASIC20.48■□□□□ 0.87
NCLP19338 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
NCLP19338 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCLP19338 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC20.48■□□□□ 0.87
NCLP19338 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.48■□□□□ 0.87
NCLP19338 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCLP19338 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NCLP19338 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCLP19338 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCLP19338 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
NCLP19338 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCLP19338 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
NCLP19338 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCLP19338 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.48■□□□□ 0.87
NCLP19338 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.48■□□□□ 0.87
NCLP19338 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCLP19338 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.48■□□□□ 0.87
NCLP19338 AC005915.1-201ENST00000624912 2018 ntBASIC20.48■□□□□ 0.87
NCLP19338 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCLP19338 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.47■□□□□ 0.87
NCLP19338 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLP19338 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLP19338 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLP19338 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NCLP19338 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NCLP19338 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLP19338 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NCLP19338 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLP19338 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.47■□□□□ 0.87
NCLP19338 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLP19338 DDX43P3-201ENST00000441064 443 ntBASIC20.47■□□□□ 0.87
NCLP19338 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
NCLP19338 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.47■□□□□ 0.87
NCLP19338 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLP19338 AC126755.1-201ENST00000525846 6405 ntBASIC20.47■□□□□ 0.87
NCLP19338 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLP19338 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NCLP19338 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLP19338 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.47■□□□□ 0.87
NCLP19338 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLP19338 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLP19338 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
NCLP19338 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLP19338 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLP19338 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCLP19338 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCLP19338 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
NCLP19338 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCLP19338 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms