Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYN1P17600 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SYN1P17600 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYN1P17600 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYN1P17600 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.49■□□□□ 0.55
SYN1P17600 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.49■□□□□ 0.55
SYN1P17600 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.48■□□□□ 0.55
SYN1P17600 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SYN1P17600 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.48■□□□□ 0.55
SYN1P17600 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.48■□□□□ 0.55
SYN1P17600 AC119751.2-201ENST00000504529 210 ntBASIC18.48■□□□□ 0.55
SYN1P17600 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.48■□□□□ 0.55
SYN1P17600 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.48■□□□□ 0.55
SYN1P17600 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.48■□□□□ 0.55
SYN1P17600 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.48■□□□□ 0.55
SYN1P17600 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
SYN1P17600 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.48■□□□□ 0.55
SYN1P17600 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SYN1P17600 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN1P17600 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SYN1P17600 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
SYN1P17600 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SYN1P17600 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYN1P17600 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.47■□□□□ 0.55
SYN1P17600 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SYN1P17600 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.47■□□□□ 0.55
SYN1P17600 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYN1P17600 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYN1P17600 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYN1P17600 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.47■□□□□ 0.55
SYN1P17600 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.47■□□□□ 0.55
SYN1P17600 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYN1P17600 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYN1P17600 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYN1P17600 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYN1P17600 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SYN1P17600 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.47■□□□□ 0.55
SYN1P17600 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.47■□□□□ 0.55
SYN1P17600 RNU1-129P-201ENST00000384064 167 ntBASIC18.47■□□□□ 0.55
SYN1P17600 AC087499.6-201ENST00000411576 835 ntBASIC18.47■□□□□ 0.55
SYN1P17600 AC142381.1-201ENST00000426099 345 ntBASIC18.47■□□□□ 0.55
SYN1P17600 MTND6P24-201ENST00000440466 518 ntBASIC18.47■□□□□ 0.55
SYN1P17600 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.47■□□□□ 0.55
SYN1P17600 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.47■□□□□ 0.55
SYN1P17600 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.47■□□□□ 0.55
SYN1P17600 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.47■□□□□ 0.55
SYN1P17600 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.47■□□□□ 0.55
SYN1P17600 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.47■□□□□ 0.55
SYN1P17600 U1.21-201ENST00000580816 167 ntBASIC18.47■□□□□ 0.55
SYN1P17600 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.47■□□□□ 0.55
SYN1P17600 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYN1P17600 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.47■□□□□ 0.55
SYN1P17600 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.47■□□□□ 0.55
SYN1P17600 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.47■□□□□ 0.55
SYN1P17600 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYN1P17600 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SYN1P17600 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.47■□□□□ 0.55
SYN1P17600 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYN1P17600 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.47■□□□□ 0.55
SYN1P17600 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYN1P17600 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYN1P17600 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYN1P17600 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SYN1P17600 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYN1P17600 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYN1P17600 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SYN1P17600 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
SYN1P17600 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.46■□□□□ 0.55
SYN1P17600 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SYN1P17600 RPL37AP1-201ENST00000412502 279 ntBASIC18.46■□□□□ 0.55
SYN1P17600 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.46■□□□□ 0.55
SYN1P17600 TTTY23B-201ENST00000442790 549 ntBASIC18.46■□□□□ 0.55
SYN1P17600 RN7SL837P-201ENST00000463010 287 ntBASIC18.46■□□□□ 0.55
SYN1P17600 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.46■□□□□ 0.55
SYN1P17600 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.46■□□□□ 0.55
SYN1P17600 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.46■□□□□ 0.55
SYN1P17600 TMEM261P1-201ENST00000604899 340 ntBASIC18.46■□□□□ 0.55
SYN1P17600 AC007431.3-201ENST00000623221 587 ntBASIC18.46■□□□□ 0.55
SYN1P17600 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SYN1P17600 CROCCP3-202ENST00000420820 1947 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms