Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2AFXP16104 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.82■□□□□ 0.44
H2AFXP16104 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.82■□□□□ 0.44
H2AFXP16104 TSPY6P-201ENST00000448518 926 ntBASIC17.82■□□□□ 0.44
H2AFXP16104 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.82■□□□□ 0.44
H2AFXP16104 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
H2AFXP16104 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.82■□□□□ 0.44
H2AFXP16104 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.82■□□□□ 0.44
H2AFXP16104 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2AFXP16104 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2AFXP16104 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2AFXP16104 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
H2AFXP16104 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.81■□□□□ 0.44
H2AFXP16104 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
H2AFXP16104 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.81■□□□□ 0.44
H2AFXP16104 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
H2AFXP16104 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
H2AFXP16104 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
H2AFXP16104 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 AC133681.1-201ENST00000465482 601 ntBASIC17.81■□□□□ 0.44
H2AFXP16104 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.81■□□□□ 0.44
H2AFXP16104 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.81■□□□□ 0.44
H2AFXP16104 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
H2AFXP16104 AC124016.1-201ENST00000609552 612 ntBASIC17.81■□□□□ 0.44
H2AFXP16104 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
H2AFXP16104 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.81■□□□□ 0.44
H2AFXP16104 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
H2AFXP16104 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.81■□□□□ 0.44
H2AFXP16104 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
H2AFXP16104 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.81■□□□□ 0.44
H2AFXP16104 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.81■□□□□ 0.44
H2AFXP16104 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.81■□□□□ 0.44
H2AFXP16104 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.8■□□□□ 0.44
H2AFXP16104 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.8■□□□□ 0.44
H2AFXP16104 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
H2AFXP16104 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.8■□□□□ 0.44
H2AFXP16104 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
H2AFXP16104 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.8■□□□□ 0.44
H2AFXP16104 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.8■□□□□ 0.44
H2AFXP16104 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
H2AFXP16104 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
H2AFXP16104 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.8■□□□□ 0.44
H2AFXP16104 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.8■□□□□ 0.44
H2AFXP16104 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
H2AFXP16104 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.8■□□□□ 0.44
H2AFXP16104 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.8■□□□□ 0.44
H2AFXP16104 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.8■□□□□ 0.44
H2AFXP16104 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.8■□□□□ 0.44
H2AFXP16104 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.8■□□□□ 0.44
H2AFXP16104 AC026748.1-201ENST00000624349 3251 ntBASIC17.8■□□□□ 0.44
H2AFXP16104 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.8■□□□□ 0.44
H2AFXP16104 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
H2AFXP16104 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.8■□□□□ 0.44
H2AFXP16104 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2AFXP16104 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
H2AFXP16104 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2AFXP16104 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
H2AFXP16104 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
H2AFXP16104 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
H2AFXP16104 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2AFXP16104 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms