Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.89■□□□□ 0.45
TCF4P15884 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
TCF4P15884 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.89■□□□□ 0.45
TCF4P15884 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCF4P15884 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCF4P15884 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TCF4P15884 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.89■□□□□ 0.45
TCF4P15884 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCF4P15884 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TCF4P15884 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TCF4P15884 AL118508.1-201ENST00000613502 2345 ntBASIC17.89■□□□□ 0.45
TCF4P15884 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCF4P15884 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.89■□□□□ 0.45
TCF4P15884 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCF4P15884 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.89■□□□□ 0.45
TCF4P15884 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TCF4P15884 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCF4P15884 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TCF4P15884 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCF4P15884 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCF4P15884 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCF4P15884 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCF4P15884 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TCF4P15884 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCF4P15884 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCF4P15884 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TCF4P15884 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TCF4P15884 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TCF4P15884 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.88■□□□□ 0.45
TCF4P15884 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
TCF4P15884 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.88■□□□□ 0.45
TCF4P15884 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.88■□□□□ 0.45
TCF4P15884 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.88■□□□□ 0.45
TCF4P15884 AC091304.2-201ENST00000564639 760 ntBASIC17.88■□□□□ 0.45
TCF4P15884 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.88■□□□□ 0.45
TCF4P15884 AL121772.3-201ENST00000610840 674 ntBASIC17.88■□□□□ 0.45
TCF4P15884 REXO1L6P-202ENST00000619970 1078 ntBASIC17.88■□□□□ 0.45
TCF4P15884 AL355877.3-201ENST00000622820 899 ntBASIC17.88■□□□□ 0.45
TCF4P15884 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCF4P15884 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.88■□□□□ 0.45
TCF4P15884 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
TCF4P15884 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TCF4P15884 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TCF4P15884 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCF4P15884 BCL2-203ENST00000589955 5011 ntBASIC17.88■□□□□ 0.45
TCF4P15884 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCF4P15884 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCF4P15884 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCF4P15884 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
TCF4P15884 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TCF4P15884 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TCF4P15884 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCF4P15884 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TCF4P15884 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.87■□□□□ 0.45
TCF4P15884 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.87■□□□□ 0.45
TCF4P15884 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCF4P15884 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCF4P15884 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TCF4P15884 RBM17P3-201ENST00000417687 1192 ntBASIC17.87■□□□□ 0.45
TCF4P15884 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.87■□□□□ 0.45
TCF4P15884 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TCF4P15884 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCF4P15884 AF238378.1-201ENST00000526806 358 ntBASIC17.87■□□□□ 0.45
TCF4P15884 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TCF4P15884 AL353135.1-201ENST00000606729 504 ntBASIC17.87■□□□□ 0.45
TCF4P15884 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCF4P15884 AL356309.3-201ENST00000624132 1934 ntBASIC17.87■□□□□ 0.45
TCF4P15884 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCF4P15884 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.87■□□□□ 0.45
TCF4P15884 AL590787.1-201ENST00000568856 1315 ntBASIC17.87■□□□□ 0.45
TCF4P15884 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TCF4P15884 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TCF4P15884 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCF4P15884 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCF4P15884 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TCF4P15884 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TCF4P15884 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.87■□□□□ 0.45
TCF4P15884 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCF4P15884 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCF4P15884 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.87■□□□□ 0.45
TCF4P15884 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCF4P15884 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.86■□□□□ 0.45
TCF4P15884 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TCF4P15884 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCF4P15884 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCF4P15884 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCF4P15884 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.86■□□□□ 0.45
TCF4P15884 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCF4P15884 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.86■□□□□ 0.45
TCF4P15884 AL645728.1-201ENST00000366221 2101 ntBASIC17.86■□□□□ 0.45
TCF4P15884 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.86■□□□□ 0.45
TCF4P15884 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCF4P15884 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCF4P15884 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCF4P15884 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCF4P15884 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCF4P15884 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCF4P15884 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TCF4P15884 PRYP5-201ENST00000451909 266 ntBASIC17.86■□□□□ 0.45
TCF4P15884 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 1923.7 ms