Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 AC098831.1-202ENST00000438821 336 ntBASIC16.3■□□□□ 0.2
ZNF888P0CJ79 RPS15P9-201ENST00000494093 319 ntBASIC16.3■□□□□ 0.2
ZNF888P0CJ79 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 AC117500.6-201ENST00000624871 588 ntBASIC16.3■□□□□ 0.2
ZNF888P0CJ79 AC005593.1-201ENST00000624894 515 ntBASIC16.3■□□□□ 0.2
ZNF888P0CJ79 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 AL805961.1-202ENST00000641562 540 ntBASIC16.3■□□□□ 0.2
ZNF888P0CJ79 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF888P0CJ79 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF888P0CJ79 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 PI4KAP1-204ENST00000612579 1703 ntBASIC16.28■□□□□ 0.2
ZNF888P0CJ79 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 AP002414.1-201ENST00000391405 1147 ntBASIC16.28■□□□□ 0.2
ZNF888P0CJ79 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF888P0CJ79 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms