Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CTSDP07339 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTSDP07339 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.29□□□□□ -0.12
CTSDP07339 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CTSDP07339 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.28□□□□□ -0.12
CTSDP07339 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.28□□□□□ -0.12
CTSDP07339 IGHGP-201ENST00000390555 1178 ntBASIC14.28□□□□□ -0.12
CTSDP07339 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.28□□□□□ -0.12
CTSDP07339 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.28□□□□□ -0.12
CTSDP07339 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.28□□□□□ -0.12
CTSDP07339 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.28□□□□□ -0.12
CTSDP07339 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.28□□□□□ -0.12
CTSDP07339 FRMD8P1-201ENST00000440433 1524 ntBASIC14.28□□□□□ -0.12
CTSDP07339 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CTSDP07339 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.28□□□□□ -0.12
CTSDP07339 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.28□□□□□ -0.12
CTSDP07339 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.28□□□□□ -0.12
CTSDP07339 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CTSDP07339 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.28□□□□□ -0.12
CTSDP07339 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CTSDP07339 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.28□□□□□ -0.12
CTSDP07339 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.28□□□□□ -0.12
CTSDP07339 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CTSDP07339 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
CTSDP07339 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.28□□□□□ -0.12
CTSDP07339 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTSDP07339 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.27□□□□□ -0.12
CTSDP07339 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CTSDP07339 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.27□□□□□ -0.12
CTSDP07339 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
CTSDP07339 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CTSDP07339 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CTSDP07339 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CTSDP07339 AL353692.3-201ENST00000407031 1396 ntBASIC14.27□□□□□ -0.12
CTSDP07339 AL596257.1-201ENST00000641463 2694 ntBASIC14.27□□□□□ -0.12
CTSDP07339 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CTSDP07339 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTSDP07339 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.27□□□□□ -0.13
CTSDP07339 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CTSDP07339 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.27□□□□□ -0.13
CTSDP07339 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.27□□□□□ -0.13
CTSDP07339 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
CTSDP07339 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTSDP07339 NAPSB-206ENST00000562112 1266 ntBASIC14.27□□□□□ -0.13
CTSDP07339 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.27□□□□□ -0.13
CTSDP07339 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.27□□□□□ -0.13
CTSDP07339 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms