Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO1P00395 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
MT-CO1P00395 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
MT-CO1P00395 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.61■□□□□ 0.41
MT-CO1P00395 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.61■□□□□ 0.41
MT-CO1P00395 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.61■□□□□ 0.41
MT-CO1P00395 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.61■□□□□ 0.41
MT-CO1P00395 Z83851.2-201ENST00000609564 659 ntBASIC17.61■□□□□ 0.41
MT-CO1P00395 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO1P00395 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.61■□□□□ 0.41
MT-CO1P00395 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
MT-CO1P00395 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.61■□□□□ 0.41
MT-CO1P00395 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO1P00395 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO1P00395 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO1P00395 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
MT-CO1P00395 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO1P00395 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO1P00395 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.61■□□□□ 0.41
MT-CO1P00395 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.61■□□□□ 0.41
MT-CO1P00395 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-CO1P00395 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.6■□□□□ 0.41
MT-CO1P00395 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-CO1P00395 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.6■□□□□ 0.41
MT-CO1P00395 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-CO1P00395 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
MT-CO1P00395 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.6■□□□□ 0.41
MT-CO1P00395 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.6■□□□□ 0.41
MT-CO1P00395 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MT-CO1P00395 ACTG1P4-201ENST00000425123 1122 ntBASIC17.6■□□□□ 0.41
MT-CO1P00395 AC009947.1-201ENST00000444350 727 ntBASIC17.6■□□□□ 0.41
MT-CO1P00395 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.6■□□□□ 0.41
MT-CO1P00395 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.6■□□□□ 0.41
MT-CO1P00395 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.6■□□□□ 0.41
MT-CO1P00395 AC005593.1-201ENST00000624894 515 ntBASIC17.6■□□□□ 0.41
MT-CO1P00395 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.6■□□□□ 0.41
MT-CO1P00395 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
MT-CO1P00395 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
MT-CO1P00395 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MT-CO1P00395 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-CO1P00395 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MT-CO1P00395 AC009053.2-201ENST00000563701 2365 ntBASIC17.6■□□□□ 0.41
MT-CO1P00395 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.6■□□□□ 0.41
MT-CO1P00395 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-CO1P00395 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.6■□□□□ 0.41
MT-CO1P00395 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-CO1P00395 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MT-CO1P00395 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
MT-CO1P00395 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.59■□□□□ 0.41
MT-CO1P00395 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.59■□□□□ 0.41
MT-CO1P00395 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.59■□□□□ 0.41
MT-CO1P00395 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.59■□□□□ 0.41
MT-CO1P00395 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.59■□□□□ 0.41
MT-CO1P00395 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MT-CO1P00395 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
MT-CO1P00395 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 ZNF259P1-201ENST00000407656 1365 ntBASIC17.59■□□□□ 0.41
MT-CO1P00395 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.59■□□□□ 0.41
MT-CO1P00395 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 PTCHD3P3-201ENST00000403073 906 ntBASIC17.59■□□□□ 0.41
MT-CO1P00395 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.59■□□□□ 0.41
MT-CO1P00395 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.59■□□□□ 0.41
MT-CO1P00395 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.59■□□□□ 0.41
MT-CO1P00395 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.59■□□□□ 0.41
MT-CO1P00395 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.59■□□□□ 0.41
MT-CO1P00395 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
MT-CO1P00395 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.59■□□□□ 0.41
MT-CO1P00395 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MT-CO1P00395 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MT-CO1P00395 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.58■□□□□ 0.41
MT-CO1P00395 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MT-CO1P00395 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MT-CO1P00395 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
MT-CO1P00395 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
MT-CO1P00395 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
MT-CO1P00395 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MT-CO1P00395 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
MT-CO1P00395 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.58■□□□□ 0.4
MT-CO1P00395 AL590787.1-201ENST00000568856 1315 ntBASIC17.58■□□□□ 0.4
MT-CO1P00395 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
MT-CO1P00395 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MT-CO1P00395 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MT-CO1P00395 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms