Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDRT1O95170 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDRT1O95170 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.37■□□□□ 0.05
CDRT1O95170 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDRT1O95170 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDRT1O95170 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDRT1O95170 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDRT1O95170 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CDRT1O95170 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDRT1O95170 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDRT1O95170 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDRT1O95170 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.37■□□□□ 0.05
CDRT1O95170 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.37■□□□□ 0.05
CDRT1O95170 EGLN1P1-201ENST00000531623 762 ntBASIC15.37■□□□□ 0.05
CDRT1O95170 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDRT1O95170 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.37■□□□□ 0.05
CDRT1O95170 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CDRT1O95170 CYP2D8P-201ENST00000433633 1490 ntBASIC15.37■□□□□ 0.05
CDRT1O95170 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.37■□□□□ 0.05
CDRT1O95170 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDRT1O95170 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.37■□□□□ 0.05
CDRT1O95170 KRT17P2-201ENST00000300992 1314 ntBASIC15.37■□□□□ 0.05
CDRT1O95170 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDRT1O95170 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDRT1O95170 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDRT1O95170 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CDRT1O95170 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDRT1O95170 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CDRT1O95170 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.36■□□□□ 0.05
CDRT1O95170 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.36■□□□□ 0.05
CDRT1O95170 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.36■□□□□ 0.05
CDRT1O95170 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDRT1O95170 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.36■□□□□ 0.05
CDRT1O95170 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CDRT1O95170 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.36■□□□□ 0.05
CDRT1O95170 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CDRT1O95170 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CDRT1O95170 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 AC128688.1-201ENST00000487626 519 ntBASIC15.36■□□□□ 0.05
CDRT1O95170 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.36■□□□□ 0.05
CDRT1O95170 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.36■□□□□ 0.05
CDRT1O95170 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.36■□□□□ 0.05
CDRT1O95170 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.36■□□□□ 0.05
CDRT1O95170 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.36■□□□□ 0.05
CDRT1O95170 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.36■□□□□ 0.05
CDRT1O95170 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.36■□□□□ 0.05
CDRT1O95170 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.36■□□□□ 0.05
CDRT1O95170 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.36■□□□□ 0.05
CDRT1O95170 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CDRT1O95170 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.36■□□□□ 0.05
CDRT1O95170 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDRT1O95170 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.36■□□□□ 0.05
CDRT1O95170 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.36■□□□□ 0.05
CDRT1O95170 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.36■□□□□ 0.05
CDRT1O95170 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDRT1O95170 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.35■□□□□ 0.05
CDRT1O95170 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
CDRT1O95170 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.35■□□□□ 0.05
CDRT1O95170 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CDRT1O95170 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.35■□□□□ 0.05
CDRT1O95170 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.35■□□□□ 0.05
CDRT1O95170 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.35■□□□□ 0.05
CDRT1O95170 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CDRT1O95170 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.35■□□□□ 0.05
CDRT1O95170 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.35■□□□□ 0.05
CDRT1O95170 TSPY15P-201ENST00000457163 923 ntBASIC15.35■□□□□ 0.05
CDRT1O95170 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.35■□□□□ 0.05
CDRT1O95170 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms