Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.42■□□□□ 0.22
LCMT2O60294 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LCMT2O60294 AC092068.3-201ENST00000587894 2016 ntBASIC16.41■□□□□ 0.22
LCMT2O60294 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.41■□□□□ 0.22
LCMT2O60294 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.41■□□□□ 0.22
LCMT2O60294 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LCMT2O60294 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.41■□□□□ 0.22
LCMT2O60294 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.41■□□□□ 0.22
LCMT2O60294 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 AC022211.2-201ENST00000585075 2527 ntBASIC16.41■□□□□ 0.22
LCMT2O60294 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.41■□□□□ 0.22
LCMT2O60294 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
LCMT2O60294 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LCMT2O60294 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.41■□□□□ 0.22
LCMT2O60294 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LCMT2O60294 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 AC136632.2-201ENST00000512891 861 ntBASIC16.41■□□□□ 0.22
LCMT2O60294 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.41■□□□□ 0.22
LCMT2O60294 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.41■□□□□ 0.22
LCMT2O60294 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.41■□□□□ 0.22
LCMT2O60294 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LCMT2O60294 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.41■□□□□ 0.22
LCMT2O60294 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.41■□□□□ 0.22
LCMT2O60294 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.41■□□□□ 0.22
LCMT2O60294 AL356488.2-201ENST00000602755 427 ntBASIC16.41■□□□□ 0.22
LCMT2O60294 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.41■□□□□ 0.22
LCMT2O60294 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.41■□□□□ 0.22
LCMT2O60294 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LCMT2O60294 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
LCMT2O60294 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LCMT2O60294 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LCMT2O60294 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 AC243591.1-201ENST00000452967 1364 ntBASIC16.4■□□□□ 0.22
LCMT2O60294 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.4■□□□□ 0.22
LCMT2O60294 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.4■□□□□ 0.22
LCMT2O60294 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.4■□□□□ 0.22
LCMT2O60294 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LCMT2O60294 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.4■□□□□ 0.22
LCMT2O60294 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.4■□□□□ 0.22
LCMT2O60294 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LCMT2O60294 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.4■□□□□ 0.22
LCMT2O60294 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.4■□□□□ 0.22
LCMT2O60294 AC079776.4-201ENST00000511039 504 ntBASIC16.4■□□□□ 0.22
LCMT2O60294 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.4■□□□□ 0.22
LCMT2O60294 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.4■□□□□ 0.22
LCMT2O60294 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LCMT2O60294 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
LCMT2O60294 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCMT2O60294 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.39■□□□□ 0.22
LCMT2O60294 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LCMT2O60294 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCMT2O60294 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCMT2O60294 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCMT2O60294 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCMT2O60294 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.39■□□□□ 0.21
LCMT2O60294 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCMT2O60294 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
LCMT2O60294 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LCMT2O60294 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCMT2O60294 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LCMT2O60294 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCMT2O60294 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCMT2O60294 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.39■□□□□ 0.21
LCMT2O60294 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms