Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EXTL3O43909 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.59■□□□□ 0.57
EXTL3O43909 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.59■□□□□ 0.57
EXTL3O43909 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXTL3O43909 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EXTL3O43909 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXTL3O43909 AC060834.1-201ENST00000443027 2032 ntBASIC18.59■□□□□ 0.57
EXTL3O43909 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EXTL3O43909 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
EXTL3O43909 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.58■□□□□ 0.57
EXTL3O43909 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.58■□□□□ 0.57
EXTL3O43909 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.58■□□□□ 0.57
EXTL3O43909 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
EXTL3O43909 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
EXTL3O43909 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
EXTL3O43909 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.58■□□□□ 0.57
EXTL3O43909 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.58■□□□□ 0.57
EXTL3O43909 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
EXTL3O43909 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.57
EXTL3O43909 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
EXTL3O43909 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
EXTL3O43909 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.58■□□□□ 0.56
EXTL3O43909 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.58■□□□□ 0.56
EXTL3O43909 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.58■□□□□ 0.56
EXTL3O43909 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EXTL3O43909 AC009947.1-201ENST00000444350 727 ntBASIC18.58■□□□□ 0.56
EXTL3O43909 AC087163.2-201ENST00000457299 853 ntBASIC18.58■□□□□ 0.56
EXTL3O43909 AC108073.2-201ENST00000464002 357 ntBASIC18.58■□□□□ 0.56
EXTL3O43909 AC108751.1-201ENST00000490852 363 ntBASIC18.58■□□□□ 0.56
EXTL3O43909 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.58■□□□□ 0.56
EXTL3O43909 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.58■□□□□ 0.56
EXTL3O43909 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EXTL3O43909 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
EXTL3O43909 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
EXTL3O43909 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
EXTL3O43909 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
EXTL3O43909 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.58■□□□□ 0.56
EXTL3O43909 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EXTL3O43909 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EXTL3O43909 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EXTL3O43909 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EXTL3O43909 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
EXTL3O43909 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EXTL3O43909 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
EXTL3O43909 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EXTL3O43909 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
EXTL3O43909 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.57■□□□□ 0.56
EXTL3O43909 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
EXTL3O43909 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
EXTL3O43909 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
EXTL3O43909 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
EXTL3O43909 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
EXTL3O43909 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.57■□□□□ 0.56
EXTL3O43909 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
EXTL3O43909 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EXTL3O43909 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EXTL3O43909 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
EXTL3O43909 KRT18P13-201ENST00000400056 1290 ntBASIC18.57■□□□□ 0.56
EXTL3O43909 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.57■□□□□ 0.56
EXTL3O43909 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
EXTL3O43909 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
EXTL3O43909 AC004790.2-201ENST00000623588 572 ntBASIC18.57■□□□□ 0.56
EXTL3O43909 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
EXTL3O43909 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
EXTL3O43909 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
EXTL3O43909 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EXTL3O43909 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EXTL3O43909 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EXTL3O43909 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EXTL3O43909 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
EXTL3O43909 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
EXTL3O43909 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.56■□□□□ 0.56
EXTL3O43909 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EXTL3O43909 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
EXTL3O43909 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
EXTL3O43909 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
EXTL3O43909 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
EXTL3O43909 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
EXTL3O43909 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EXTL3O43909 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.56■□□□□ 0.56
EXTL3O43909 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.56■□□□□ 0.56
EXTL3O43909 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EXTL3O43909 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EXTL3O43909 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.56■□□□□ 0.56
EXTL3O43909 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.56■□□□□ 0.56
EXTL3O43909 RPL13AP23-201ENST00000480739 586 ntBASIC18.56■□□□□ 0.56
EXTL3O43909 SLC25A6P2-201ENST00000497974 877 ntBASIC18.56■□□□□ 0.56
EXTL3O43909 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
EXTL3O43909 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.56■□□□□ 0.56
EXTL3O43909 AC145285.3-201ENST00000564603 959 ntBASIC18.56■□□□□ 0.56
EXTL3O43909 Z83851.2-201ENST00000609564 659 ntBASIC18.56■□□□□ 0.56
EXTL3O43909 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.56■□□□□ 0.56
EXTL3O43909 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
EXTL3O43909 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.56■□□□□ 0.56
EXTL3O43909 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.56■□□□□ 0.56
EXTL3O43909 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
EXTL3O43909 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.56■□□□□ 0.56
EXTL3O43909 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EXTL3O43909 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EXTL3O43909 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms