Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
HFM1A2PYH4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
HFM1A2PYH4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
HFM1A2PYH4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC25.14■■□□□ 1.62
HFM1A2PYH4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC25.14■■□□□ 1.62
HFM1A2PYH4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC25.14■■□□□ 1.62
HFM1A2PYH4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
HFM1A2PYH4 CD7-202ENST00000578509 925 ntTSL 3 BASIC25.14■■□□□ 1.62
HFM1A2PYH4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC25.14■■□□□ 1.62
HFM1A2PYH4 AC022145.2-201ENST00000598203 171 ntBASIC25.14■■□□□ 1.62
HFM1A2PYH4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC25.14■■□□□ 1.62
HFM1A2PYH4 AC079781.4-201ENST00000641908 219 ntBASIC25.14■■□□□ 1.62
HFM1A2PYH4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
HFM1A2PYH4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
HFM1A2PYH4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC25.14■■□□□ 1.62
HFM1A2PYH4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
HFM1A2PYH4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC25.14■■□□□ 1.62
HFM1A2PYH4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC25.14■■□□□ 1.61
HFM1A2PYH4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
HFM1A2PYH4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
HFM1A2PYH4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
HFM1A2PYH4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC25.14■■□□□ 1.61
HFM1A2PYH4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
HFM1A2PYH4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC25.14■■□□□ 1.61
HFM1A2PYH4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HFM1A2PYH4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HFM1A2PYH4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC25.13■■□□□ 1.61
HFM1A2PYH4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC25.13■■□□□ 1.61
HFM1A2PYH4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HFM1A2PYH4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
HFM1A2PYH4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
HFM1A2PYH4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC25.13■■□□□ 1.61
HFM1A2PYH4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HFM1A2PYH4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
HFM1A2PYH4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
HFM1A2PYH4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
HFM1A2PYH4 PCDHB17P-201ENST00000539533 2393 ntBASIC25.13■■□□□ 1.61
HFM1A2PYH4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC25.13■■□□□ 1.61
HFM1A2PYH4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC25.13■■□□□ 1.61
HFM1A2PYH4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
HFM1A2PYH4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
HFM1A2PYH4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
HFM1A2PYH4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
HFM1A2PYH4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HFM1A2PYH4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HFM1A2PYH4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
HFM1A2PYH4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
HFM1A2PYH4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC25.12■■□□□ 1.61
HFM1A2PYH4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
HFM1A2PYH4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC25.12■■□□□ 1.61
HFM1A2PYH4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC25.12■■□□□ 1.61
HFM1A2PYH4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC25.12■■□□□ 1.61
HFM1A2PYH4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC25.12■■□□□ 1.61
HFM1A2PYH4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC25.12■■□□□ 1.61
HFM1A2PYH4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
HFM1A2PYH4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
HFM1A2PYH4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
HFM1A2PYH4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC25.12■■□□□ 1.61
HFM1A2PYH4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
HFM1A2PYH4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
HFM1A2PYH4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
HFM1A2PYH4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
HFM1A2PYH4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
HFM1A2PYH4 CEND1P1-201ENST00000451006 455 ntBASIC25.12■■□□□ 1.61
HFM1A2PYH4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
HFM1A2PYH4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC25.12■■□□□ 1.61
HFM1A2PYH4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
HFM1A2PYH4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC25.11■■□□□ 1.61
HFM1A2PYH4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC25.11■■□□□ 1.61
HFM1A2PYH4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HFM1A2PYH4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC25.11■■□□□ 1.61
HFM1A2PYH4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
HFM1A2PYH4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC25.11■■□□□ 1.61
HFM1A2PYH4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
HFM1A2PYH4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HFM1A2PYH4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
HFM1A2PYH4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
HFM1A2PYH4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HFM1A2PYH4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC25.11■■□□□ 1.61
HFM1A2PYH4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC25.11■■□□□ 1.61
HFM1A2PYH4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC25.11■■□□□ 1.61
HFM1A2PYH4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC25.11■■□□□ 1.61
HFM1A2PYH4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
HFM1A2PYH4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
HFM1A2PYH4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC25.11■■□□□ 1.61
HFM1A2PYH4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HFM1A2PYH4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HFM1A2PYH4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
HFM1A2PYH4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC25.1■■□□□ 1.61
HFM1A2PYH4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC25.1■■□□□ 1.61
HFM1A2PYH4 AC006277.1-201ENST00000624348 1610 ntBASIC25.1■■□□□ 1.61
HFM1A2PYH4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HFM1A2PYH4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
HFM1A2PYH4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
HFM1A2PYH4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HFM1A2PYH4 LETM1P2-201ENST00000597330 2178 ntBASIC25.1■■□□□ 1.61
HFM1A2PYH4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC25.1■■□□□ 1.61
HFM1A2PYH4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
HFM1A2PYH4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC25.1■■□□□ 1.61
HFM1A2PYH4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms