Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TRAV18A0A075B6X5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV18A0A075B6X5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV18A0A075B6X5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV18A0A075B6X5 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV18A0A075B6X5 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 AC022188.1-201ENST00000620960 1664 ntBASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 AL158047.1-201ENST00000445918 881 ntBASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 PAUPAR-201ENST00000630360 2965 ntBASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 NORAD-201ENST00000565493 5339 ntBASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAV18A0A075B6X5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV18A0A075B6X5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV18A0A075B6X5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms