Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 INTS4P1-201ENST00000438455 1935 ntBASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 AL049757.1-201ENST00000616842 1596 ntBASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 HCG4P8-203ENST00000443049 980 ntBASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DRB4X5D2U9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 AL353593.2-201ENST00000602529 1483 ntBASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 AC016396.2-201ENST00000562575 1417 ntBASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DRB4X5D2U9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DRB4X5D2U9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
HLA-DRB4X5D2U9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DRB4X5D2U9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DRB4X5D2U9 KRT8P10-201ENST00000450021 1447 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms