Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 AL121761.2-201ENST00000598007 1648 ntBASIC20.59■□□□□ 0.89
SALL1Q9NSC2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL1Q9NSC2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 AC005412.3-201ENST00000580309 715 ntBASIC20.58■□□□□ 0.89
SALL1Q9NSC2 MIR4515-201ENST00000584082 81 ntBASIC20.58■□□□□ 0.89
SALL1Q9NSC2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 AC027612.4-201ENST00000605371 583 ntBASIC20.58■□□□□ 0.89
SALL1Q9NSC2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SALL1Q9NSC2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SALL1Q9NSC2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SALL1Q9NSC2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.58■□□□□ 0.88
SALL1Q9NSC2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.58■□□□□ 0.88
SALL1Q9NSC2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.58■□□□□ 0.88
SALL1Q9NSC2 AC116353.5-201ENST00000638148 1699 ntBASIC20.58■□□□□ 0.88
SALL1Q9NSC2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.57■□□□□ 0.88
SALL1Q9NSC2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 AC105339.1-204ENST00000636249 355 ntBASIC20.57■□□□□ 0.88
SALL1Q9NSC2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 AL023806.1-201ENST00000603994 1649 ntBASIC20.57■□□□□ 0.88
SALL1Q9NSC2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL1Q9NSC2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 AC002056.1-201ENST00000395613 760 ntBASIC20.56■□□□□ 0.88
SALL1Q9NSC2 METTL21AP1-201ENST00000438852 635 ntBASIC20.56■□□□□ 0.88
SALL1Q9NSC2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 AC099522.2-201ENST00000607001 744 ntBASIC20.56■□□□□ 0.88
SALL1Q9NSC2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.56■□□□□ 0.88
SALL1Q9NSC2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms