Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.48■□□□□ 0.23
PIF1Q9H611 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PIF1Q9H611 SLC25A1P3-201ENST00000395415 828 ntBASIC16.48■□□□□ 0.23
PIF1Q9H611 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.48■□□□□ 0.23
PIF1Q9H611 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.48■□□□□ 0.23
PIF1Q9H611 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.48■□□□□ 0.23
PIF1Q9H611 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
PIF1Q9H611 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PIF1Q9H611 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.48■□□□□ 0.23
PIF1Q9H611 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.48■□□□□ 0.23
PIF1Q9H611 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PIF1Q9H611 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PIF1Q9H611 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.47■□□□□ 0.23
PIF1Q9H611 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.47■□□□□ 0.23
PIF1Q9H611 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.47■□□□□ 0.23
PIF1Q9H611 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PIF1Q9H611 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.47■□□□□ 0.23
PIF1Q9H611 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PIF1Q9H611 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PIF1Q9H611 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PIF1Q9H611 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PIF1Q9H611 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PIF1Q9H611 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PIF1Q9H611 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PIF1Q9H611 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.47■□□□□ 0.23
PIF1Q9H611 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PIF1Q9H611 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PIF1Q9H611 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.47■□□□□ 0.23
PIF1Q9H611 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.47■□□□□ 0.23
PIF1Q9H611 MTCL1P1-201ENST00000446207 792 ntBASIC16.47■□□□□ 0.23
PIF1Q9H611 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PIF1Q9H611 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.47■□□□□ 0.23
PIF1Q9H611 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.47■□□□□ 0.23
PIF1Q9H611 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PIF1Q9H611 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PIF1Q9H611 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.47■□□□□ 0.23
PIF1Q9H611 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PIF1Q9H611 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PIF1Q9H611 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.47■□□□□ 0.23
PIF1Q9H611 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
PIF1Q9H611 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PIF1Q9H611 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PIF1Q9H611 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.47■□□□□ 0.23
PIF1Q9H611 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PIF1Q9H611 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PIF1Q9H611 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PIF1Q9H611 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PIF1Q9H611 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PIF1Q9H611 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PIF1Q9H611 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.46■□□□□ 0.23
PIF1Q9H611 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PIF1Q9H611 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.46■□□□□ 0.23
PIF1Q9H611 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PIF1Q9H611 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PIF1Q9H611 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.46■□□□□ 0.23
PIF1Q9H611 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PIF1Q9H611 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PIF1Q9H611 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PIF1Q9H611 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PIF1Q9H611 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PIF1Q9H611 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.46■□□□□ 0.23
PIF1Q9H611 AC092597.1-201ENST00000487352 616 ntBASIC16.46■□□□□ 0.23
PIF1Q9H611 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.46■□□□□ 0.23
PIF1Q9H611 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.46■□□□□ 0.23
PIF1Q9H611 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PIF1Q9H611 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PIF1Q9H611 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PIF1Q9H611 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.46■□□□□ 0.23
PIF1Q9H611 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PIF1Q9H611 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PIF1Q9H611 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PIF1Q9H611 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.46■□□□□ 0.23
PIF1Q9H611 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PIF1Q9H611 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PIF1Q9H611 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PIF1Q9H611 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PIF1Q9H611 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.46■□□□□ 0.23
PIF1Q9H611 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
PIF1Q9H611 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
PIF1Q9H611 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
PIF1Q9H611 TSPY26P-202ENST00000565928 3884 ntBASIC16.45■□□□□ 0.22
PIF1Q9H611 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.45■□□□□ 0.22
PIF1Q9H611 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.45■□□□□ 0.22
PIF1Q9H611 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.45■□□□□ 0.22
PIF1Q9H611 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms