Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK3Q9H422 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK3Q9H422 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK3Q9H422 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.67■□□□□ 0.58
HIPK3Q9H422 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK3Q9H422 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK3Q9H422 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK3Q9H422 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK3Q9H422 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK3Q9H422 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK3Q9H422 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK3Q9H422 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK3Q9H422 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK3Q9H422 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
HIPK3Q9H422 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.66■□□□□ 0.58
HIPK3Q9H422 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK3Q9H422 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK3Q9H422 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HIPK3Q9H422 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HIPK3Q9H422 CRB3P1-201ENST00000449338 276 ntBASIC18.66■□□□□ 0.58
HIPK3Q9H422 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK3Q9H422 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.66■□□□□ 0.58
HIPK3Q9H422 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.66■□□□□ 0.58
HIPK3Q9H422 AC109635.5-201ENST00000533593 962 ntBASIC18.66■□□□□ 0.58
HIPK3Q9H422 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.66■□□□□ 0.58
HIPK3Q9H422 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.66■□□□□ 0.58
HIPK3Q9H422 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.66■□□□□ 0.58
HIPK3Q9H422 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.66■□□□□ 0.58
HIPK3Q9H422 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HIPK3Q9H422 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HIPK3Q9H422 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK3Q9H422 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK3Q9H422 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK3Q9H422 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK3Q9H422 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.66■□□□□ 0.58
HIPK3Q9H422 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HIPK3Q9H422 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK3Q9H422 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK3Q9H422 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK3Q9H422 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.65■□□□□ 0.58
HIPK3Q9H422 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.65■□□□□ 0.58
HIPK3Q9H422 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK3Q9H422 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.65■□□□□ 0.58
HIPK3Q9H422 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK3Q9H422 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK3Q9H422 GNAS-203ENST00000306120 1878 ntBASIC18.65■□□□□ 0.58
HIPK3Q9H422 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HIPK3Q9H422 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.65■□□□□ 0.58
HIPK3Q9H422 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HIPK3Q9H422 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
HIPK3Q9H422 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HIPK3Q9H422 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.65■□□□□ 0.58
HIPK3Q9H422 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK3Q9H422 ALG1L8P-201ENST00000533887 760 ntBASIC18.65■□□□□ 0.58
HIPK3Q9H422 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
HIPK3Q9H422 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.65■□□□□ 0.58
HIPK3Q9H422 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.65■□□□□ 0.58
HIPK3Q9H422 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK3Q9H422 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK3Q9H422 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.65■□□□□ 0.58
HIPK3Q9H422 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HIPK3Q9H422 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
HIPK3Q9H422 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK3Q9H422 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK3Q9H422 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.65■□□□□ 0.58
HIPK3Q9H422 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK3Q9H422 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HIPK3Q9H422 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HIPK3Q9H422 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HIPK3Q9H422 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.64■□□□□ 0.58
HIPK3Q9H422 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
HIPK3Q9H422 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIPK3Q9H422 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.64■□□□□ 0.57
HIPK3Q9H422 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIPK3Q9H422 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIPK3Q9H422 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HIPK3Q9H422 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIPK3Q9H422 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HIPK3Q9H422 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIPK3Q9H422 AC027307.3-201ENST00000594262 1100 ntBASIC18.64■□□□□ 0.57
HIPK3Q9H422 AL358472.5-202ENST00000641448 1267 ntBASIC18.64■□□□□ 0.57
HIPK3Q9H422 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIPK3Q9H422 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms