Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 AC006557.2-201ENST00000592985 1240 ntBASIC17.44■□□□□ 0.38
SEMA3CQ99985 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.44■□□□□ 0.38
SEMA3CQ99985 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
SEMA3CQ99985 AL773604.1-201ENST00000617417 272 ntBASIC17.44■□□□□ 0.38
SEMA3CQ99985 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.44■□□□□ 0.38
SEMA3CQ99985 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEMA3CQ99985 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SEMA3CQ99985 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SEMA3CQ99985 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SEMA3CQ99985 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEMA3CQ99985 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SEMA3CQ99985 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEMA3CQ99985 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SEMA3CQ99985 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEMA3CQ99985 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SEMA3CQ99985 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.44■□□□□ 0.38
SEMA3CQ99985 GPR89P-201ENST00000407924 1495 ntBASIC17.44■□□□□ 0.38
SEMA3CQ99985 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SEMA3CQ99985 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEMA3CQ99985 AC092053.1-201ENST00000605787 1936 ntBASIC17.43■□□□□ 0.38
SEMA3CQ99985 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEMA3CQ99985 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEMA3CQ99985 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SEMA3CQ99985 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEMA3CQ99985 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEMA3CQ99985 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEMA3CQ99985 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SEMA3CQ99985 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 SLC25A6P4-201ENST00000586535 553 ntBASIC17.43■□□□□ 0.38
SEMA3CQ99985 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEMA3CQ99985 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEMA3CQ99985 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEMA3CQ99985 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEMA3CQ99985 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEMA3CQ99985 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEMA3CQ99985 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEMA3CQ99985 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SEMA3CQ99985 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEMA3CQ99985 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.43■□□□□ 0.38
SEMA3CQ99985 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA3CQ99985 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA3CQ99985 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA3CQ99985 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA3CQ99985 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 AC006504.4-201ENST00000592118 1568 ntBASIC17.42■□□□□ 0.38
SEMA3CQ99985 RPS2P28-201ENST00000314255 741 ntBASIC17.42■□□□□ 0.38
SEMA3CQ99985 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA3CQ99985 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA3CQ99985 ELK2BP-201ENST00000415014 1224 ntBASIC17.42■□□□□ 0.38
SEMA3CQ99985 AL031284.1-201ENST00000419297 478 ntBASIC17.42■□□□□ 0.38
SEMA3CQ99985 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA3CQ99985 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 AC012640.2-201ENST00000561606 901 ntBASIC17.42■□□□□ 0.38
SEMA3CQ99985 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 AC139530.3-201ENST00000620344 690 ntBASIC17.42■□□□□ 0.38
SEMA3CQ99985 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 AC008735.5-201ENST00000623544 497 ntBASIC17.42■□□□□ 0.38
SEMA3CQ99985 FAM215A-202ENST00000632077 792 ntBASIC17.42■□□□□ 0.38
SEMA3CQ99985 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA3CQ99985 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA3CQ99985 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA3CQ99985 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA3CQ99985 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA3CQ99985 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA3CQ99985 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA3CQ99985 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SEMA3CQ99985 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
SEMA3CQ99985 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.41■□□□□ 0.38
SEMA3CQ99985 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA3CQ99985 AC080080.1-201ENST00000625121 2420 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms