Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN18Q99952 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN18Q99952 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.47■□□□□ 0.71
PTPN18Q99952 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN18Q99952 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN18Q99952 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
PTPN18Q99952 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN18Q99952 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.47■□□□□ 0.71
PTPN18Q99952 AL132655.2-201ENST00000596276 594 ntBASIC19.47■□□□□ 0.71
PTPN18Q99952 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
PTPN18Q99952 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN18Q99952 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN18Q99952 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN18Q99952 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PTPN18Q99952 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN18Q99952 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN18Q99952 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN18Q99952 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN18Q99952 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PTPN18Q99952 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PTPN18Q99952 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN18Q99952 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN18Q99952 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPN18Q99952 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN18Q99952 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.46■□□□□ 0.71
PTPN18Q99952 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN18Q99952 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPN18Q99952 GIMAP3P-201ENST00000495150 836 ntBASIC19.46■□□□□ 0.71
PTPN18Q99952 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPN18Q99952 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.46■□□□□ 0.71
PTPN18Q99952 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN18Q99952 AL844908.2-201ENST00000609461 460 ntBASIC19.46■□□□□ 0.71
PTPN18Q99952 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PTPN18Q99952 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.46■□□□□ 0.71
PTPN18Q99952 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN18Q99952 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN18Q99952 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN18Q99952 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PTPN18Q99952 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PTPN18Q99952 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN18Q99952 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN18Q99952 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN18Q99952 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PTPN18Q99952 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.46■□□□□ 0.71
PTPN18Q99952 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PTPN18Q99952 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PTPN18Q99952 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PTPN18Q99952 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PTPN18Q99952 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.45■□□□□ 0.7
PTPN18Q99952 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN18Q99952 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN18Q99952 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPN18Q99952 AC120498.9-201ENST00000339021 3867 ntBASIC19.45■□□□□ 0.7
PTPN18Q99952 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.45■□□□□ 0.7
PTPN18Q99952 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPN18Q99952 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PTPN18Q99952 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN18Q99952 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPN18Q99952 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
PTPN18Q99952 DGCR5-201ENST00000399539 862 ntBASIC19.45■□□□□ 0.7
PTPN18Q99952 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
PTPN18Q99952 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.45■□□□□ 0.7
PTPN18Q99952 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPN18Q99952 AL353779.1-201ENST00000434793 351 ntBASIC19.45■□□□□ 0.7
PTPN18Q99952 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPN18Q99952 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.45■□□□□ 0.7
PTPN18Q99952 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPN18Q99952 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
PTPN18Q99952 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.45■□□□□ 0.7
PTPN18Q99952 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPN18Q99952 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.45■□□□□ 0.7
PTPN18Q99952 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN18Q99952 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPN18Q99952 AC004840.1-201ENST00000636359 365 ntBASIC19.45■□□□□ 0.7
PTPN18Q99952 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPN18Q99952 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN18Q99952 FOXO1B-201ENST00000504678 1527 ntBASIC19.45■□□□□ 0.7
PTPN18Q99952 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
PTPN18Q99952 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PTPN18Q99952 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN18Q99952 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN18Q99952 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN18Q99952 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PTPN18Q99952 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PTPN18Q99952 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN18Q99952 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN18Q99952 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN18Q99952 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.44■□□□□ 0.7
PTPN18Q99952 AC079776.1-201ENST00000401540 1152 ntBASIC19.44■□□□□ 0.7
PTPN18Q99952 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN18Q99952 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN18Q99952 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.44■□□□□ 0.7
PTPN18Q99952 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN18Q99952 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.44■□□□□ 0.7
PTPN18Q99952 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.44■□□□□ 0.7
PTPN18Q99952 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PTPN18Q99952 AC073389.1-201ENST00000595595 795 ntBASIC19.44■□□□□ 0.7
PTPN18Q99952 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN18Q99952 TEX28P1-201ENST00000613479 1221 ntBASIC19.44■□□□□ 0.7
PTPN18Q99952 TEX28P2-201ENST00000617764 1221 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms