Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXB1Q99853 AC006557.2-201ENST00000592985 1240 ntBASIC15.13■□□□□ 0.01
FOXB1Q99853 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.13■□□□□ 0.01
FOXB1Q99853 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
FOXB1Q99853 AC004706.3-202ENST00000621574 984 ntBASIC15.13■□□□□ 0.01
FOXB1Q99853 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
FOXB1Q99853 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXB1Q99853 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXB1Q99853 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXB1Q99853 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
FOXB1Q99853 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXB1Q99853 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
FOXB1Q99853 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
FOXB1Q99853 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
FOXB1Q99853 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
FOXB1Q99853 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXB1Q99853 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
FOXB1Q99853 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXB1Q99853 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXB1Q99853 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.12■□□□□ 0.01
FOXB1Q99853 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXB1Q99853 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
FOXB1Q99853 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.12■□□□□ 0.01
FOXB1Q99853 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.12■□□□□ 0.01
FOXB1Q99853 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
FOXB1Q99853 AP002469.2-201ENST00000531724 424 ntBASIC15.12■□□□□ 0.01
FOXB1Q99853 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXB1Q99853 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXB1Q99853 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXB1Q99853 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXB1Q99853 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
FOXB1Q99853 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXB1Q99853 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
FOXB1Q99853 AL590787.1-201ENST00000568856 1315 ntBASIC15.12■□□□□ 0.01
FOXB1Q99853 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXB1Q99853 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXB1Q99853 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXB1Q99853 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXB1Q99853 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXB1Q99853 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXB1Q99853 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXB1Q99853 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
FOXB1Q99853 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXB1Q99853 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
FOXB1Q99853 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXB1Q99853 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXB1Q99853 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
FOXB1Q99853 RPS2P28-201ENST00000314255 741 ntBASIC15.11■□□□□ 0.01
FOXB1Q99853 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
FOXB1Q99853 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXB1Q99853 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXB1Q99853 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXB1Q99853 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXB1Q99853 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXB1Q99853 AC124947.2-201ENST00000547118 1133 ntBASIC15.11■□□□□ 0.01
FOXB1Q99853 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXB1Q99853 AC104692.2-201ENST00000603054 253 ntBASIC15.11■□□□□ 0.01
FOXB1Q99853 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.11■□□□□ 0.01
FOXB1Q99853 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXB1Q99853 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXB1Q99853 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXB1Q99853 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
FOXB1Q99853 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXB1Q99853 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
FOXB1Q99853 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXB1Q99853 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXB1Q99853 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
FOXB1Q99853 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
FOXB1Q99853 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
FOXB1Q99853 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms