Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.7■□□□□ 0.42
CDCA3Q99618 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA3Q99618 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA3Q99618 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.7■□□□□ 0.42
CDCA3Q99618 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCA3Q99618 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDCA3Q99618 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDCA3Q99618 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.69■□□□□ 0.42
CDCA3Q99618 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.69■□□□□ 0.42
CDCA3Q99618 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA3Q99618 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDCA3Q99618 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA3Q99618 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA3Q99618 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA3Q99618 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDCA3Q99618 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CDCA3Q99618 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA3Q99618 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA3Q99618 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA3Q99618 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.69■□□□□ 0.42
CDCA3Q99618 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.69■□□□□ 0.42
CDCA3Q99618 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.69■□□□□ 0.42
CDCA3Q99618 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.69■□□□□ 0.42
CDCA3Q99618 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.69■□□□□ 0.42
CDCA3Q99618 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA3Q99618 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA3Q99618 AL138828.2-201ENST00000615812 383 ntBASIC17.69■□□□□ 0.42
CDCA3Q99618 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.69■□□□□ 0.42
CDCA3Q99618 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.69■□□□□ 0.42
CDCA3Q99618 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.69■□□□□ 0.42
CDCA3Q99618 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.69■□□□□ 0.42
CDCA3Q99618 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CDCA3Q99618 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA3Q99618 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA3Q99618 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.69■□□□□ 0.42
CDCA3Q99618 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA3Q99618 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.69■□□□□ 0.42
CDCA3Q99618 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.69■□□□□ 0.42
CDCA3Q99618 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CDCA3Q99618 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA3Q99618 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCA3Q99618 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CDCA3Q99618 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.68■□□□□ 0.42
CDCA3Q99618 AL035456.1-201ENST00000456064 1369 ntBASIC17.68■□□□□ 0.42
CDCA3Q99618 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA3Q99618 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDCA3Q99618 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.68■□□□□ 0.42
CDCA3Q99618 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA3Q99618 AL138781.2-201ENST00000617896 1843 ntBASIC17.68■□□□□ 0.42
CDCA3Q99618 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA3Q99618 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA3Q99618 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.68■□□□□ 0.42
CDCA3Q99618 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA3Q99618 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.68■□□□□ 0.42
CDCA3Q99618 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA3Q99618 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDCA3Q99618 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA3Q99618 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.68■□□□□ 0.42
CDCA3Q99618 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.68■□□□□ 0.42
CDCA3Q99618 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA3Q99618 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.68■□□□□ 0.42
CDCA3Q99618 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.68■□□□□ 0.42
CDCA3Q99618 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.68■□□□□ 0.42
CDCA3Q99618 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.68■□□□□ 0.42
CDCA3Q99618 AL138918.1-201ENST00000568306 659 ntBASIC17.68■□□□□ 0.42
CDCA3Q99618 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.68■□□□□ 0.42
CDCA3Q99618 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CDCA3Q99618 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.68■□□□□ 0.42
CDCA3Q99618 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.68■□□□□ 0.42
CDCA3Q99618 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.68■□□□□ 0.42
CDCA3Q99618 AP3S2-216ENST00000617003 1561 ntBASIC17.68■□□□□ 0.42
CDCA3Q99618 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.68■□□□□ 0.42
CDCA3Q99618 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDCA3Q99618 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.68■□□□□ 0.42
CDCA3Q99618 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA3Q99618 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDCA3Q99618 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA3Q99618 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA3Q99618 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA3Q99618 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.68■□□□□ 0.42
CDCA3Q99618 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA3Q99618 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CDCA3Q99618 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA3Q99618 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDCA3Q99618 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCA3Q99618 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.68■□□□□ 0.42
CDCA3Q99618 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA3Q99618 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.67■□□□□ 0.42
CDCA3Q99618 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.67■□□□□ 0.42
CDCA3Q99618 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA3Q99618 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA3Q99618 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CDCA3Q99618 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.67■□□□□ 0.42
CDCA3Q99618 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CDCA3Q99618 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA3Q99618 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA3Q99618 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.67■□□□□ 0.42
CDCA3Q99618 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.67■□□□□ 0.42
CDCA3Q99618 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.67■□□□□ 0.42
CDCA3Q99618 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms