Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AP002490.2-201ENST00000524791 560 ntBASIC13.98□□□□□ -0.17
RAB40CQ96S21 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40CQ96S21 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40CQ96S21 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40CQ96S21 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40CQ96S21 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40CQ96S21 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40CQ96S21 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 AC007950.2-201ENST00000615045 2347 ntBASIC13.97□□□□□ -0.17
RAB40CQ96S21 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 MMP23A-201ENST00000234610 1017 ntBASIC13.97□□□□□ -0.17
RAB40CQ96S21 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 AC128688.1-201ENST00000487626 519 ntBASIC13.97□□□□□ -0.17
RAB40CQ96S21 IGHV3-52-201ENST00000519770 353 ntBASIC13.97□□□□□ -0.17
RAB40CQ96S21 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RAB40CQ96S21 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40CQ96S21 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
RAB40CQ96S21 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RAB40CQ96S21 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.96□□□□□ -0.17
RAB40CQ96S21 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RAB40CQ96S21 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.96□□□□□ -0.17
RAB40CQ96S21 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.96□□□□□ -0.17
RAB40CQ96S21 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RAB40CQ96S21 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.96□□□□□ -0.17
RAB40CQ96S21 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 TSPY14P-201ENST00000303979 915 ntBASIC13.96□□□□□ -0.17
RAB40CQ96S21 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.96□□□□□ -0.17
RAB40CQ96S21 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
RAB40CQ96S21 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAB40CQ96S21 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.96□□□□□ -0.17
RAB40CQ96S21 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.96□□□□□ -0.17
RAB40CQ96S21 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.96□□□□□ -0.17
RAB40CQ96S21 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms