Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC092053.1-201ENST00000605787 1936 ntBASIC12.91□□□□□ -0.34
LINC00477Q96M19 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.91□□□□□ -0.34
LINC00477Q96M19 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LINC00477Q96M19 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LINC00477Q96M19 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LINC00477Q96M19 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
LINC00477Q96M19 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00477Q96M19 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00477Q96M19 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LINC00477Q96M19 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00477Q96M19 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00477Q96M19 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 AC003669.1-201ENST00000334569 611 ntBASIC12.9□□□□□ -0.34
LINC00477Q96M19 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00477Q96M19 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC00477Q96M19 AC009336.1-201ENST00000608941 1553 ntBASIC12.9□□□□□ -0.35
LINC00477Q96M19 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00477Q96M19 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 PCDHA14-201ENST00000506751 2298 ntBASIC12.89□□□□□ -0.35
LINC00477Q96M19 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 AP002490.2-201ENST00000524791 560 ntBASIC12.89□□□□□ -0.35
LINC00477Q96M19 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 AC005336.2-201ENST00000593183 939 ntBASIC12.89□□□□□ -0.35
LINC00477Q96M19 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LINC00477Q96M19 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00477Q96M19 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms