Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CALR3Q96L12 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CALR3Q96L12 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CALR3Q96L12 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.21■□□□□ 0.5
CALR3Q96L12 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CALR3Q96L12 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CALR3Q96L12 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CALR3Q96L12 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.2■□□□□ 0.5
CALR3Q96L12 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CALR3Q96L12 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.2■□□□□ 0.5
CALR3Q96L12 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.2■□□□□ 0.5
CALR3Q96L12 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CALR3Q96L12 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.2■□□□□ 0.5
CALR3Q96L12 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.2■□□□□ 0.5
CALR3Q96L12 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
CALR3Q96L12 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.2■□□□□ 0.5
CALR3Q96L12 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 RNF216P1-203ENST00000404404 2427 ntBASIC18.2■□□□□ 0.5
CALR3Q96L12 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CALR3Q96L12 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CALR3Q96L12 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CALR3Q96L12 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.19■□□□□ 0.5
CALR3Q96L12 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.19■□□□□ 0.5
CALR3Q96L12 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.19■□□□□ 0.5
CALR3Q96L12 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CALR3Q96L12 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CALR3Q96L12 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.19■□□□□ 0.5
CALR3Q96L12 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CALR3Q96L12 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CALR3Q96L12 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CALR3Q96L12 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CALR3Q96L12 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CALR3Q96L12 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CALR3Q96L12 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CALR3Q96L12 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CALR3Q96L12 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CALR3Q96L12 KLF4P1-201ENST00000412782 1185 ntBASIC18.19■□□□□ 0.5
CALR3Q96L12 AC104076.2-201ENST00000448912 469 ntBASIC18.19■□□□□ 0.5
CALR3Q96L12 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
CALR3Q96L12 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.19■□□□□ 0.5
CALR3Q96L12 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CALR3Q96L12 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CALR3Q96L12 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.19■□□□□ 0.5
CALR3Q96L12 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.19■□□□□ 0.5
CALR3Q96L12 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.19■□□□□ 0.5
CALR3Q96L12 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.19■□□□□ 0.5
CALR3Q96L12 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CALR3Q96L12 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CALR3Q96L12 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
CALR3Q96L12 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CALR3Q96L12 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.19■□□□□ 0.5
CALR3Q96L12 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.19■□□□□ 0.5
CALR3Q96L12 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CALR3Q96L12 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CALR3Q96L12 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CALR3Q96L12 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CALR3Q96L12 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.19■□□□□ 0.5
CALR3Q96L12 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CALR3Q96L12 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CALR3Q96L12 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.18■□□□□ 0.5
CALR3Q96L12 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALR3Q96L12 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALR3Q96L12 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CALR3Q96L12 AC092068.3-201ENST00000587894 2016 ntBASIC18.18■□□□□ 0.5
CALR3Q96L12 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALR3Q96L12 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALR3Q96L12 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CALR3Q96L12 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CALR3Q96L12 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALR3Q96L12 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.18■□□□□ 0.5
CALR3Q96L12 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.18■□□□□ 0.5
CALR3Q96L12 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CALR3Q96L12 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CALR3Q96L12 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALR3Q96L12 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.18■□□□□ 0.5
CALR3Q96L12 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.18■□□□□ 0.5
CALR3Q96L12 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.18■□□□□ 0.5
CALR3Q96L12 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
CALR3Q96L12 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CALR3Q96L12 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALR3Q96L12 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CALR3Q96L12 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALR3Q96L12 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALR3Q96L12 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms