Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.41■□□□□ 0.22
ITCHQ96J02 AC011840.4-201ENST00000578471 627 ntBASIC16.41■□□□□ 0.22
ITCHQ96J02 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.41■□□□□ 0.22
ITCHQ96J02 AL353801.3-201ENST00000609898 542 ntBASIC16.41■□□□□ 0.22
ITCHQ96J02 AL592071.1-201ENST00000611956 408 ntBASIC16.41■□□□□ 0.22
ITCHQ96J02 AC124864.1-201ENST00000623408 392 ntBASIC16.41■□□□□ 0.22
ITCHQ96J02 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.41■□□□□ 0.22
ITCHQ96J02 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.41■□□□□ 0.22
ITCHQ96J02 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 KRT8P10-201ENST00000450021 1447 ntBASIC16.41■□□□□ 0.22
ITCHQ96J02 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.41■□□□□ 0.22
ITCHQ96J02 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.41■□□□□ 0.22
ITCHQ96J02 AL603756.1-201ENST00000606511 2163 ntBASIC16.41■□□□□ 0.22
ITCHQ96J02 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ITCHQ96J02 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.41■□□□□ 0.22
ITCHQ96J02 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITCHQ96J02 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.4■□□□□ 0.22
ITCHQ96J02 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
ITCHQ96J02 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.4■□□□□ 0.22
ITCHQ96J02 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.4■□□□□ 0.22
ITCHQ96J02 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 AL645929.1-201ENST00000420084 975 ntBASIC16.4■□□□□ 0.22
ITCHQ96J02 TSPY22P-201ENST00000427496 604 ntBASIC16.4■□□□□ 0.22
ITCHQ96J02 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.4■□□□□ 0.22
ITCHQ96J02 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ITCHQ96J02 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.4■□□□□ 0.22
ITCHQ96J02 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.4■□□□□ 0.22
ITCHQ96J02 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.4■□□□□ 0.22
ITCHQ96J02 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.4■□□□□ 0.22
ITCHQ96J02 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.4■□□□□ 0.22
ITCHQ96J02 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 AC083849.1-201ENST00000615227 514 ntBASIC16.4■□□□□ 0.22
ITCHQ96J02 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ITCHQ96J02 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.4■□□□□ 0.22
ITCHQ96J02 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.4■□□□□ 0.22
ITCHQ96J02 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
ITCHQ96J02 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.4■□□□□ 0.22
ITCHQ96J02 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ITCHQ96J02 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.39■□□□□ 0.22
ITCHQ96J02 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ITCHQ96J02 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITCHQ96J02 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITCHQ96J02 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ITCHQ96J02 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
ITCHQ96J02 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ITCHQ96J02 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITCHQ96J02 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ITCHQ96J02 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ITCHQ96J02 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.39■□□□□ 0.21
ITCHQ96J02 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITCHQ96J02 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITCHQ96J02 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.39■□□□□ 0.21
ITCHQ96J02 AC078925.2-201ENST00000624013 1973 ntBASIC16.39■□□□□ 0.21
ITCHQ96J02 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ITCHQ96J02 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.39■□□□□ 0.21
ITCHQ96J02 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.39■□□□□ 0.21
ITCHQ96J02 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ITCHQ96J02 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.39■□□□□ 0.21
ITCHQ96J02 AC090616.6-201ENST00000582640 721 ntBASIC16.39■□□□□ 0.21
ITCHQ96J02 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITCHQ96J02 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.39■□□□□ 0.21
ITCHQ96J02 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.39■□□□□ 0.21
ITCHQ96J02 RNF216P1-203ENST00000404404 2427 ntBASIC16.39■□□□□ 0.21
ITCHQ96J02 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ITCHQ96J02 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.39■□□□□ 0.21
ITCHQ96J02 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ITCHQ96J02 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITCHQ96J02 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 345.3 ms