Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.04■□□□□ 0.96
RPGRQ92834 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPGRQ92834 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPGRQ92834 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.04■□□□□ 0.96
RPGRQ92834 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPGRQ92834 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RPGRQ92834 ABALON-201ENST00000629058 1903 ntBASIC21.04■□□□□ 0.96
RPGRQ92834 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.04■□□□□ 0.96
RPGRQ92834 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPGRQ92834 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRQ92834 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRQ92834 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRQ92834 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RPGRQ92834 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRQ92834 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRQ92834 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.03■□□□□ 0.96
RPGRQ92834 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRQ92834 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRQ92834 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRQ92834 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRQ92834 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.03■□□□□ 0.96
RPGRQ92834 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRQ92834 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRQ92834 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
RPGRQ92834 AC005034.1-201ENST00000426657 489 ntBASIC21.03■□□□□ 0.96
RPGRQ92834 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.03■□□□□ 0.96
RPGRQ92834 UGT1A2P-201ENST00000454886 866 ntBASIC21.03■□□□□ 0.96
RPGRQ92834 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRQ92834 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC21.03■□□□□ 0.96
RPGRQ92834 SLC25A39P2-201ENST00000537614 270 ntBASIC21.03■□□□□ 0.96
RPGRQ92834 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.03■□□□□ 0.96
RPGRQ92834 MIR6080-201ENST00000617359 66 ntBASIC21.03■□□□□ 0.96
RPGRQ92834 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRQ92834 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RPGRQ92834 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.03■□□□□ 0.96
RPGRQ92834 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPGRQ92834 WASH6P-202ENST00000359512 1437 ntBASIC21.03■□□□□ 0.96
RPGRQ92834 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RPGRQ92834 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RPGRQ92834 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RPGRQ92834 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RPGRQ92834 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPGRQ92834 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPGRQ92834 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.02■□□□□ 0.96
RPGRQ92834 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPGRQ92834 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RPGRQ92834 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.02■□□□□ 0.96
RPGRQ92834 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.02■□□□□ 0.96
RPGRQ92834 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.02■□□□□ 0.96
RPGRQ92834 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.02■□□□□ 0.96
RPGRQ92834 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
RPGRQ92834 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.02■□□□□ 0.96
RPGRQ92834 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.02■□□□□ 0.96
RPGRQ92834 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPGRQ92834 AL035252.4-201ENST00000624174 288 ntBASIC21.02■□□□□ 0.96
RPGRQ92834 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RPGRQ92834 AC084121.4-201ENST00000641598 221 ntBASIC21.02■□□□□ 0.96
RPGRQ92834 AF228730.8-201ENST00000642140 221 ntBASIC21.02■□□□□ 0.96
RPGRQ92834 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.02■□□□□ 0.96
RPGRQ92834 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.02■□□□□ 0.96
RPGRQ92834 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPGRQ92834 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RPGRQ92834 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPGRQ92834 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RPGRQ92834 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RPGRQ92834 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
RPGRQ92834 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRQ92834 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
RPGRQ92834 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRQ92834 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRQ92834 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRQ92834 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.01■□□□□ 0.95
RPGRQ92834 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
RPGRQ92834 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRQ92834 AC004408.2-201ENST00000623613 2777 ntBASIC21.01■□□□□ 0.95
RPGRQ92834 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RPGRQ92834 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRQ92834 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRQ92834 MIR661-201ENST00000384842 89 ntBASIC21.01■□□□□ 0.95
RPGRQ92834 HCG4-201ENST00000418983 998 ntBASIC21.01■□□□□ 0.95
RPGRQ92834 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC21.01■□□□□ 0.95
RPGRQ92834 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RPGRQ92834 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.01■□□□□ 0.95
RPGRQ92834 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC21.01■□□□□ 0.95
RPGRQ92834 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.01■□□□□ 0.95
RPGRQ92834 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.01■□□□□ 0.95
RPGRQ92834 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.01■□□□□ 0.95
RPGRQ92834 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.01■□□□□ 0.95
RPGRQ92834 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RPGRQ92834 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRQ92834 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRQ92834 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRQ92834 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.01■□□□□ 0.95
RPGRQ92834 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.01■□□□□ 0.95
RPGRQ92834 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.01■□□□□ 0.95
RPGRQ92834 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPGRQ92834 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RPGRQ92834 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.01■□□□□ 0.95
RPGRQ92834 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21■□□□□ 0.95
RPGRQ92834 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms