Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.3■□□□□ 0.52
SHC3Q92529 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.3■□□□□ 0.52
SHC3Q92529 TERC-201ENST00000602385 541 ntBASIC18.3■□□□□ 0.52
SHC3Q92529 AC004706.3-202ENST00000621574 984 ntBASIC18.3■□□□□ 0.52
SHC3Q92529 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.3■□□□□ 0.52
SHC3Q92529 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHC3Q92529 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHC3Q92529 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHC3Q92529 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.3■□□□□ 0.52
SHC3Q92529 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.3■□□□□ 0.52
SHC3Q92529 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHC3Q92529 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SHC3Q92529 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
SHC3Q92529 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SHC3Q92529 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC3Q92529 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SHC3Q92529 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC3Q92529 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.29■□□□□ 0.52
SHC3Q92529 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.29■□□□□ 0.52
SHC3Q92529 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC3Q92529 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.29■□□□□ 0.52
SHC3Q92529 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC3Q92529 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.29■□□□□ 0.52
SHC3Q92529 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.29■□□□□ 0.52
SHC3Q92529 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.29■□□□□ 0.52
SHC3Q92529 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.29■□□□□ 0.52
SHC3Q92529 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SHC3Q92529 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.29■□□□□ 0.52
SHC3Q92529 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SHC3Q92529 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC3Q92529 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.29■□□□□ 0.52
SHC3Q92529 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC3Q92529 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.29■□□□□ 0.52
SHC3Q92529 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC3Q92529 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SHC3Q92529 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHC3Q92529 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SHC3Q92529 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC3Q92529 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC3Q92529 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC3Q92529 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC3Q92529 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC3Q92529 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SHC3Q92529 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.28■□□□□ 0.52
SHC3Q92529 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.28■□□□□ 0.52
SHC3Q92529 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.28■□□□□ 0.52
SHC3Q92529 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHC3Q92529 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHC3Q92529 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SHC3Q92529 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.28■□□□□ 0.52
SHC3Q92529 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
SHC3Q92529 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SHC3Q92529 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC3Q92529 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC3Q92529 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SHC3Q92529 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.28■□□□□ 0.52
SHC3Q92529 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SHC3Q92529 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SHC3Q92529 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SHC3Q92529 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SHC3Q92529 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHC3Q92529 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
SHC3Q92529 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SHC3Q92529 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.27■□□□□ 0.52
SHC3Q92529 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SHC3Q92529 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.27■□□□□ 0.52
SHC3Q92529 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SHC3Q92529 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SHC3Q92529 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHC3Q92529 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.27■□□□□ 0.52
SHC3Q92529 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.27■□□□□ 0.52
SHC3Q92529 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHC3Q92529 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.27■□□□□ 0.52
SHC3Q92529 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.27■□□□□ 0.52
SHC3Q92529 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHC3Q92529 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SHC3Q92529 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SHC3Q92529 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SHC3Q92529 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SHC3Q92529 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.27■□□□□ 0.52
SHC3Q92529 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.27■□□□□ 0.52
SHC3Q92529 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SHC3Q92529 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms