Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.81■□□□□ 0.28
ATL1Q8WXF7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATL1Q8WXF7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATL1Q8WXF7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ATL1Q8WXF7 AC148477.5-201ENST00000625164 1645 ntBASIC16.81■□□□□ 0.28
ATL1Q8WXF7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATL1Q8WXF7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATL1Q8WXF7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.81■□□□□ 0.28
ATL1Q8WXF7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATL1Q8WXF7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATL1Q8WXF7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 CROCCP1-201ENST00000426910 5675 ntBASIC16.8■□□□□ 0.28
ATL1Q8WXF7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATL1Q8WXF7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 AC124947.2-201ENST00000547118 1133 ntBASIC16.79■□□□□ 0.28
ATL1Q8WXF7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 GPR89P-201ENST00000407924 1495 ntBASIC16.79■□□□□ 0.28
ATL1Q8WXF7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ATL1Q8WXF7 AC097637.2-201ENST00000624096 1997 ntBASIC16.78■□□□□ 0.28
ATL1Q8WXF7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
ATL1Q8WXF7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms