Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 AC108725.1-201ENST00000495472 409 ntBASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 USP32P1-208ENST00000506594 1164 ntBASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 AC243960.2-201ENST00000600996 747 ntBASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.7■□□□□ 0.42
PRUNE2Q8WUY3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 AC016027.1-202ENST00000607927 1699 ntBASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 MIR4706-201ENST00000582134 82 ntBASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 MIR4515-201ENST00000584082 81 ntBASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRUNE2Q8WUY3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 MYCLP2-201ENST00000449268 967 ntBASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 MIR4722-201ENST00000578292 60 ntBASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 AC104457.1-201ENST00000401024 814 ntBASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 RARRES2P9-201ENST00000565168 469 ntBASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.68■□□□□ 0.42
PRUNE2Q8WUY3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 MIR1247-201ENST00000408206 136 ntBASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms