Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH19Q8TAB3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 SART3-203ENST00000546611 1184 ntBASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 AL160237.2-201ENST00000556165 472 ntBASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH19Q8TAB3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 AC084018.2-201ENST00000613093 2607 ntBASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 AC008608.2-201ENST00000606089 416 ntBASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 AL353135.1-201ENST00000606729 504 ntBASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 RNF216P1-203ENST00000404404 2427 ntBASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH19Q8TAB3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 AL590787.1-201ENST00000568856 1315 ntBASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 FLJ38576-201ENST00000623820 2459 ntBASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 AF238378.1-201ENST00000526806 358 ntBASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDH19Q8TAB3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms