Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 AL590787.1-201ENST00000568856 1315 ntBASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 HNRNPDP1-201ENST00000439535 754 ntBASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 SLC25A6P4-201ENST00000586535 553 ntBASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC148Q8NFR7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 MRPL3P1-201ENST00000400109 1033 ntBASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 ELK2BP-201ENST00000415014 1224 ntBASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 AL031284.1-201ENST00000419297 478 ntBASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 KRT18P27-201ENST00000427733 1299 ntBASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 FAM215A-202ENST00000632077 792 ntBASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC148Q8NFR7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 AC009078.2-202ENST00000463353 338 ntBASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 AC105339.3-201ENST00000560043 636 ntBASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 MIR1199-201ENST00000621445 119 ntBASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 AC099398.1-201ENST00000567919 2776 ntBASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC148Q8NFR7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms