Protein–RNA interactions for Protein: Q8NBK3

SUMF1, Sulfatase-modifying factor 1, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1Q8NBK3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 AC116562.4-201ENST00000641316 2276 ntBASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 AC011495.1-201ENST00000498085 584 ntBASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 AC126763.1-201ENST00000552015 2118 ntBASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 AC003101.2-201ENST00000612557 442 ntBASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 AL133338.1-201ENST00000565695 1517 ntBASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SUMF1Q8NBK3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SUMF1Q8NBK3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 AC087499.5-201ENST00000452760 1342 ntBASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 FAM8A2P-201ENST00000528813 1142 ntBASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 RARRES2P9-201ENST00000565168 469 ntBASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 MIR4259-201ENST00000584466 101 ntBASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SUMF1Q8NBK3 AC046185.3-201ENST00000623228 1824 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms