Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC009949.1-201ENST00000623048 1830 ntBASIC18.66■□□□□ 0.58
VPS52Q8N1B4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 SNHG9-202ENST00000564014 471 ntBASIC18.66■□□□□ 0.58
VPS52Q8N1B4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 AL513190.1-201ENST00000621254 727 ntBASIC18.66■□□□□ 0.58
VPS52Q8N1B4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 KRT18P28-201ENST00000453838 1332 ntBASIC18.66■□□□□ 0.58
VPS52Q8N1B4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS52Q8N1B4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 BX276092.7-203ENST00000637198 1536 ntBASIC18.65■□□□□ 0.58
VPS52Q8N1B4 AC134043.2-201ENST00000624206 2238 ntBASIC18.65■□□□□ 0.58
VPS52Q8N1B4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 IGHV3-52-201ENST00000519770 353 ntBASIC18.65■□□□□ 0.58
VPS52Q8N1B4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 STK25P1-201ENST00000585406 838 ntBASIC18.65■□□□□ 0.58
VPS52Q8N1B4 C20orf181-201ENST00000623918 480 ntBASIC18.65■□□□□ 0.58
VPS52Q8N1B4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 CROCCP1-201ENST00000426910 5675 ntBASIC18.65■□□□□ 0.58
VPS52Q8N1B4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS52Q8N1B4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VPS52Q8N1B4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VPS52Q8N1B4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
VPS52Q8N1B4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VPS52Q8N1B4 AC106820.2-201ENST00000563775 3264 ntBASIC18.64■□□□□ 0.58
VPS52Q8N1B4 AC097637.2-201ENST00000624096 1997 ntBASIC18.64■□□□□ 0.58
VPS52Q8N1B4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
VPS52Q8N1B4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
VPS52Q8N1B4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.64■□□□□ 0.58
VPS52Q8N1B4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
VPS52Q8N1B4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 AL805961.1-202ENST00000641562 540 ntBASIC18.64■□□□□ 0.57
VPS52Q8N1B4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS52Q8N1B4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms