Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 CYP2T1P-202ENST00000641596 2535 ntBASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 AL138966.2-201ENST00000621997 464 ntBASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 LINC01568-207ENST00000641790 1380 ntBASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.12■□□□□ 0.33
NUDCD3Q8IVD9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 ZNF444P1-201ENST00000559497 298 ntBASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.11■□□□□ 0.33
NUDCD3Q8IVD9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms