Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 AC007967.2-201ENST00000432613 625 ntBASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 VN2R19P-201ENST00000442399 1052 ntBASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.83■□□□□ 0.29
LRRTM4Q86VH4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 AC087163.2-201ENST00000457299 853 ntBASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 POLD2P1-201ENST00000511220 997 ntBASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 RNA5SP416-201ENST00000516838 111 ntBASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 AL023806.1-201ENST00000603994 1649 ntBASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 AC064836.3-201ENST00000607928 673 ntBASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LRRTM4Q86VH4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 AC141586.5-201ENST00000624546 2050 ntBASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 KRT18P3-201ENST00000451602 1288 ntBASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRTM4Q86VH4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms