Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC010507.1-201ENST00000633895 436 ntBASIC20.36■□□□□ 0.85
CTR9Q6PD62 AC092865.6-201ENST00000642101 219 ntBASIC20.36■□□□□ 0.85
CTR9Q6PD62 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTR9Q6PD62 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.36■□□□□ 0.85
CTR9Q6PD62 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTR9Q6PD62 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.36■□□□□ 0.85
CTR9Q6PD62 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTR9Q6PD62 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTR9Q6PD62 BCL2-203ENST00000589955 5011 ntBASIC20.36■□□□□ 0.85
CTR9Q6PD62 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTR9Q6PD62 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.36■□□□□ 0.85
CTR9Q6PD62 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.36■□□□□ 0.85
CTR9Q6PD62 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTR9Q6PD62 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CTR9Q6PD62 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTR9Q6PD62 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.35■□□□□ 0.85
CTR9Q6PD62 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTR9Q6PD62 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTR9Q6PD62 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTR9Q6PD62 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.35■□□□□ 0.85
CTR9Q6PD62 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.35■□□□□ 0.85
CTR9Q6PD62 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CTR9Q6PD62 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTR9Q6PD62 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CTR9Q6PD62 EGFEM1P-202ENST00000431685 1563 ntBASIC20.35■□□□□ 0.85
CTR9Q6PD62 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTR9Q6PD62 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CTR9Q6PD62 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.35■□□□□ 0.85
CTR9Q6PD62 BX842568.4-201ENST00000421222 227 ntBASIC20.35■□□□□ 0.85
CTR9Q6PD62 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.35■□□□□ 0.85
CTR9Q6PD62 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTR9Q6PD62 AC092865.5-201ENST00000545435 363 ntBASIC20.35■□□□□ 0.85
CTR9Q6PD62 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTR9Q6PD62 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CTR9Q6PD62 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTR9Q6PD62 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTR9Q6PD62 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTR9Q6PD62 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.35■□□□□ 0.85
CTR9Q6PD62 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTR9Q6PD62 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTR9Q6PD62 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTR9Q6PD62 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CTR9Q6PD62 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CTR9Q6PD62 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.34■□□□□ 0.85
CTR9Q6PD62 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.34■□□□□ 0.85
CTR9Q6PD62 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTR9Q6PD62 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTR9Q6PD62 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTR9Q6PD62 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTR9Q6PD62 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.34■□□□□ 0.85
CTR9Q6PD62 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTR9Q6PD62 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CTR9Q6PD62 KRT18P13-201ENST00000400056 1290 ntBASIC20.34■□□□□ 0.85
CTR9Q6PD62 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CTR9Q6PD62 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.34■□□□□ 0.85
CTR9Q6PD62 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.34■□□□□ 0.85
CTR9Q6PD62 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTR9Q6PD62 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.34■□□□□ 0.85
CTR9Q6PD62 AC096734.2-201ENST00000562054 433 ntBASIC20.34■□□□□ 0.85
CTR9Q6PD62 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTR9Q6PD62 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.34■□□□□ 0.85
CTR9Q6PD62 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.34■□□□□ 0.85
CTR9Q6PD62 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTR9Q6PD62 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTR9Q6PD62 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTR9Q6PD62 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CTR9Q6PD62 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTR9Q6PD62 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTR9Q6PD62 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTR9Q6PD62 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.34■□□□□ 0.85
CTR9Q6PD62 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTR9Q6PD62 AC002310.6-201ENST00000624451 1377 ntBASIC20.34■□□□□ 0.85
CTR9Q6PD62 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTR9Q6PD62 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTR9Q6PD62 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTR9Q6PD62 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.33■□□□□ 0.85
CTR9Q6PD62 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.33■□□□□ 0.85
CTR9Q6PD62 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTR9Q6PD62 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.33■□□□□ 0.85
CTR9Q6PD62 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTR9Q6PD62 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
CTR9Q6PD62 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CTR9Q6PD62 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTR9Q6PD62 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTR9Q6PD62 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTR9Q6PD62 YBX2P1-201ENST00000394192 760 ntBASIC20.33■□□□□ 0.85
CTR9Q6PD62 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.33■□□□□ 0.85
CTR9Q6PD62 RHOQP3-201ENST00000437982 621 ntBASIC20.33■□□□□ 0.85
CTR9Q6PD62 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.33■□□□□ 0.85
CTR9Q6PD62 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.33■□□□□ 0.85
CTR9Q6PD62 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.33■□□□□ 0.85
CTR9Q6PD62 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.33■□□□□ 0.85
CTR9Q6PD62 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.33■□□□□ 0.85
CTR9Q6PD62 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.33■□□□□ 0.85
CTR9Q6PD62 AL513190.1-201ENST00000621254 727 ntBASIC20.33■□□□□ 0.85
CTR9Q6PD62 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.33■□□□□ 0.85
CTR9Q6PD62 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTR9Q6PD62 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTR9Q6PD62 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CTR9Q6PD62 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms