Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 AL353135.1-201ENST00000606729 504 ntBASIC17.83■□□□□ 0.44
LRRC38Q5VT99 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.83■□□□□ 0.44
LRRC38Q5VT99 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC38Q5VT99 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 RBM17P3-201ENST00000417687 1192 ntBASIC17.82■□□□□ 0.44
LRRC38Q5VT99 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
LRRC38Q5VT99 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 AL021920.2-201ENST00000624828 1351 ntBASIC17.81■□□□□ 0.44
LRRC38Q5VT99 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 AC138894.3-201ENST00000603787 634 ntBASIC17.81■□□□□ 0.44
LRRC38Q5VT99 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC38Q5VT99 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 AL603756.1-201ENST00000606511 2163 ntBASIC17.8■□□□□ 0.44
LRRC38Q5VT99 AL645728.1-201ENST00000366221 2101 ntBASIC17.8■□□□□ 0.44
LRRC38Q5VT99 AL590787.1-201ENST00000568856 1315 ntBASIC17.8■□□□□ 0.44
LRRC38Q5VT99 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms