Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBWD3Q5JTY5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
CBWD3Q5JTY5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBWD3Q5JTY5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.55■□□□□ 0.56
CBWD3Q5JTY5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CBWD3Q5JTY5 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 AC078925.2-201ENST00000624013 1973 ntBASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 AP002414.1-201ENST00000391405 1147 ntBASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 AC004706.3-202ENST00000621574 984 ntBASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBWD3Q5JTY5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 PCDHB17P-201ENST00000539533 2393 ntBASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.53■□□□□ 0.56
CBWD3Q5JTY5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 AC079781.3-201ENST00000449110 356 ntBASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 AC139887.3-201ENST00000568585 713 ntBASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CBWD3Q5JTY5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CBWD3Q5JTY5 AC243591.1-201ENST00000452967 1364 ntBASIC18.52■□□□□ 0.55
CBWD3Q5JTY5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms