Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 MIR1224-201ENST00000408193 85 ntBASIC16.42■□□□□ 0.22
SPIN4Q56A73 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPIN4Q56A73 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SPIN4Q56A73 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.42■□□□□ 0.22
SPIN4Q56A73 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.42■□□□□ 0.22
SPIN4Q56A73 AC138894.3-201ENST00000603787 634 ntBASIC16.42■□□□□ 0.22
SPIN4Q56A73 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.42■□□□□ 0.22
SPIN4Q56A73 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.42■□□□□ 0.22
SPIN4Q56A73 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.42■□□□□ 0.22
SPIN4Q56A73 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPIN4Q56A73 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPIN4Q56A73 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPIN4Q56A73 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SPIN4Q56A73 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SPIN4Q56A73 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPIN4Q56A73 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPIN4Q56A73 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPIN4Q56A73 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPIN4Q56A73 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPIN4Q56A73 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPIN4Q56A73 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPIN4Q56A73 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPIN4Q56A73 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPIN4Q56A73 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 AC097637.2-201ENST00000624096 1997 ntBASIC16.41■□□□□ 0.22
SPIN4Q56A73 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPIN4Q56A73 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPIN4Q56A73 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPIN4Q56A73 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 AGGF1P2-201ENST00000426656 2106 ntBASIC16.41■□□□□ 0.22
SPIN4Q56A73 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPIN4Q56A73 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPIN4Q56A73 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPIN4Q56A73 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPIN4Q56A73 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPIN4Q56A73 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPIN4Q56A73 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SPIN4Q56A73 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SPIN4Q56A73 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPIN4Q56A73 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.4■□□□□ 0.22
SPIN4Q56A73 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.4■□□□□ 0.22
SPIN4Q56A73 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPIN4Q56A73 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPIN4Q56A73 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPIN4Q56A73 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPIN4Q56A73 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPIN4Q56A73 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPIN4Q56A73 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.4■□□□□ 0.22
SPIN4Q56A73 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPIN4Q56A73 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPIN4Q56A73 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPIN4Q56A73 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.4■□□□□ 0.22
SPIN4Q56A73 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.4■□□□□ 0.22
SPIN4Q56A73 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPIN4Q56A73 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SPIN4Q56A73 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.4■□□□□ 0.22
SPIN4Q56A73 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.4■□□□□ 0.22
SPIN4Q56A73 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.4■□□□□ 0.22
SPIN4Q56A73 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPIN4Q56A73 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPIN4Q56A73 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPIN4Q56A73 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPIN4Q56A73 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPIN4Q56A73 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SPIN4Q56A73 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SPIN4Q56A73 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SPIN4Q56A73 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SPIN4Q56A73 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SPIN4Q56A73 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SPIN4Q56A73 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.39■□□□□ 0.21
SPIN4Q56A73 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.39■□□□□ 0.21
SPIN4Q56A73 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SPIN4Q56A73 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SPIN4Q56A73 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms