Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP1Q00587 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDC42EP1Q00587 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDC42EP1Q00587 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.64■□□□□ 0.58
CDC42EP1Q00587 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CDC42EP1Q00587 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 SLC25A1P3-201ENST00000395415 828 ntBASIC18.64■□□□□ 0.57
CDC42EP1Q00587 PMS2P2-201ENST00000425039 1128 ntBASIC18.64■□□□□ 0.57
CDC42EP1Q00587 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42EP1Q00587 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 AC004835.2-201ENST00000603762 682 ntBASIC18.63■□□□□ 0.57
CDC42EP1Q00587 AC105339.1-204ENST00000636249 355 ntBASIC18.63■□□□□ 0.57
CDC42EP1Q00587 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.63■□□□□ 0.57
CDC42EP1Q00587 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 HMGA1P7-201ENST00000406908 502 ntBASIC18.62■□□□□ 0.57
CDC42EP1Q00587 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 AL513210.1-201ENST00000629608 234 ntBASIC18.62■□□□□ 0.57
CDC42EP1Q00587 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 KRT18P28-201ENST00000453838 1332 ntBASIC18.62■□□□□ 0.57
CDC42EP1Q00587 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42EP1Q00587 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP1Q00587 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.61■□□□□ 0.57
CDC42EP1Q00587 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP1Q00587 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.61■□□□□ 0.57
CDC42EP1Q00587 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP1Q00587 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP1Q00587 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP1Q00587 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP1Q00587 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.61■□□□□ 0.57
CDC42EP1Q00587 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms