Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 KRT18P55-202ENST00000578578 1546 ntBASIC14.91□□□□□ -0.02
UBA52P62987 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
UBA52P62987 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBA52P62987 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBA52P62987 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.91□□□□□ -0.02
UBA52P62987 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBA52P62987 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
UBA52P62987 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBA52P62987 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBA52P62987 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.91□□□□□ -0.02
UBA52P62987 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.9□□□□□ -0.02
UBA52P62987 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
UBA52P62987 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.9□□□□□ -0.02
UBA52P62987 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.9□□□□□ -0.02
UBA52P62987 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
UBA52P62987 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
UBA52P62987 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
UBA52P62987 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
UBA52P62987 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.9□□□□□ -0.02
UBA52P62987 AC009078.2-202ENST00000463353 338 ntBASIC14.9□□□□□ -0.02
UBA52P62987 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.9□□□□□ -0.02
UBA52P62987 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.9□□□□□ -0.02
UBA52P62987 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.9□□□□□ -0.02
UBA52P62987 LINC00554-201ENST00000564841 3011 ntBASIC14.9□□□□□ -0.02
UBA52P62987 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBA52P62987 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.9□□□□□ -0.02
UBA52P62987 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
UBA52P62987 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.89□□□□□ -0.03
UBA52P62987 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.89□□□□□ -0.03
UBA52P62987 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
UBA52P62987 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
UBA52P62987 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
UBA52P62987 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
UBA52P62987 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.89□□□□□ -0.03
UBA52P62987 KRT18P23-201ENST00000435622 1283 ntBASIC14.89□□□□□ -0.03
UBA52P62987 FOSL1P1-201ENST00000511041 816 ntBASIC14.89□□□□□ -0.03
UBA52P62987 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.89□□□□□ -0.03
UBA52P62987 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.89□□□□□ -0.03
UBA52P62987 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.89□□□□□ -0.03
UBA52P62987 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.89□□□□□ -0.03
UBA52P62987 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
UBA52P62987 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.89□□□□□ -0.03
UBA52P62987 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
UBA52P62987 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
UBA52P62987 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
UBA52P62987 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBA52P62987 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
UBA52P62987 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
UBA52P62987 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.88□□□□□ -0.03
UBA52P62987 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.88□□□□□ -0.03
UBA52P62987 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.88□□□□□ -0.03
UBA52P62987 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
UBA52P62987 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBA52P62987 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms